PEMT, chr17:17408877-17495022 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11651487 chr17:17444575 PEMT C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4646383 chr17:17454883 PEMT C - 13 T vs. C 0.033 (T) 0.083 (T) >1 (-) 15 (-) >0.05
rs1242508 chr17:17364762 MED9 [-15538bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12950093 chr17:17511203 PEMT [+16181bp] C - 13 T vs. C 0.45 (T) 0.05 (T) >1 (-) 0 (-) >0.05
rs12937187 chr17:17513295 PEMT [+18273bp] C - 13 T vs. C 0.45 (C) - <1 (-) 0 (-) >0.05
rs73300575 chr17:17489687 PEMT C - 3 T vs. C - - >1 (-) 19 (-) >0.05
rs34075240 chr17:17464077 PEMT C - 13 A vs. G 0.383 (G) - <1 (-) 0 (-) >0.05
rs12946063 chr17:17512768 PEMT [+17746bp] C - 13 T vs. C 0.45 (C) - <1 (-) 0 (-) >0.05
rs12949039 chr17:17509721 PEMT [+14699bp] C - 13 A vs. C 0.45 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs72826284 chr17:17393446 MED9 C - 9 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs7223804 chr17:17535645 PEMT [+40623bp] C - 13 C vs. G 0.017 (C) - >1 (-) 11 (-) >0.05
rs117707025 chr17:17526661 PEMT [+31639bp] C - 8 C vs. G - 0.1 (G) >1 (-) 0 (-) >0.05
rs111639985 chr17:17360857 MED9 [-19443bp] C - 13 C vs. G - - >1 (-) 57 (-) >0.05
rs2882463 chr17:17523403 PEMT [+28381bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs34664666 chr17:17513404 PEMT [+18382bp] C - 13 A vs. G 0.433 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs12952629 chr17:17513189 PEMT [+18167bp] C - 13 A vs. G 0.45 (A) 0.05 (A) >1 (-) 0 (-) >0.05
rs143496285 chr17:17499826 PEMT [+4804bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs12952281 chr17:17511992 PEMT [+16970bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs115612770 chr17:17397409 RASD1 [-342bp] C - 13 A vs. C 0.042 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs55874034 chr17:17405577 PEMT [-3300bp] C - 13 A vs. G 0.083 (A) 0.333 (A) >1 (-) 0 (-) >0.05
rs4244599 chr17:17493086 PEMT C - 13 T vs. C 0.433 (T) 0.292 (C) >1 (-) 0 (-) >0.05
rs11078392 chr17:17543033 RAI1 [-41754bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs56126242 chr17:17404496 PEMT [-4381bp] C - 13 T vs. C 0.083 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs57928542 chr17:17501190 PEMT [+6168bp] C - 13 A vs. C 0.092 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs146929616 chr17:17364182 MED9 [-16118bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs73298562 chr17:17465554 PEMT C - 10 T vs. C 0.008 (T) - >1 (-) 3 (-) >0.05
rs73298579 chr17:17472076 PEMT C - 10 A vs. G 0.008 (A) - >1 (-) 4 (-) >0.05
rs143293117 chr17:17452631 PEMT C - 13 A vs. G - - >1 (-) 22 (-) >0.05
rs8082473 chr17:17540923 RAI1 [-43864bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs150881684 chr17:17526351 PEMT [+31329bp] C - 11 T vs. C - - <1 (-) 14 (-) >0.05
rs12936632 chr17:17476380 PEMT C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs61398800 chr17:17403985 RASD1 [+4276bp] C - 13 T vs. C 0.083 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs144117473 chr17:17467506 PEMT C - 9 A vs. G - - >1 (-) 3 (-) >0.05
rs117588728 chr17:17505383 PEMT [+10361bp] C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs111276530 chr17:17496869 PEMT [+1847bp] C - 12 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs35104205 chr17:17478775 PEMT C - 13 A vs. C 0.483 (C) 0.183 (A) >1 (-) 0 (-) >0.05
rs56028126 chr17:17413311 PEMT C - 13 T vs. C 0.042 (T) 0.25 (T) >1 (-) 0 (-) >0.05
rs12325817 chr17:17486519 PEMT C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs3760188 chr17:17487440 PEMT C - 13 T vs. C 0.483 (C) 0.2 (T) >1 (-) 0 (-) >0.05
rs76023355 chr17:17541701 RAI1 [-43086bp] C - 13 T vs. C 0.042 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs148230604 chr17:17463334 PEMT C - 3 T vs. C - - <1 (-) 13 (-) >0.05
rs58494746 chr17:17470604 PEMT C - 10 T vs. C - - >1 (-) 9 (-) >0.05
rs57304518 chr17:17470104 PEMT C - 10 T vs. C - - >1 (-) 9 (-) >0.05
rs9901291 chr17:17541750 RAI1 [-43037bp] C - 13 A vs. G 0.408 (A) 0.375 (G) >1 (-) 0 (-) >0.05
rs73288113 chr17:17517624 PEMT [+22602bp] C - 13 T vs. G 0.083 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs144872336 chr17:17507653 PEMT [+12631bp] C - 11 T vs. C - - <1 (-) 6 (-) >0.05
rs6502607 chr17:17490489 PEMT C - 13 T vs. C 0.108 (C) 0.492 (C) <1 (-) 0 (-) >0.05
rs4646381 chr17:17456290 PEMT C - 12 T vs. C 0.033 (T) 0.083 (T) <1 (-) 12 (-) >0.05
rs113852621 chr17:17489383 PEMT C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs146515289 chr17:17429521 PEMT C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs62063651 chr17:17423696 PEMT C - 9 A vs. T 0.017 (A) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.