POU5F1, chr6:31132119-31148508 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6913137 chr6:31090078 PSORS1C1 C - 12 T vs. G 0.058 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs1623026 chr6:31188312 HCG27 [+16567bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs142943269 chr6:31198499 HCG27 [+26754bp] C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs9391814 chr6:31145107 POU5F1 C - 12 A vs. G - - >1 (-) 21 (-) >0.05
rs2073716 chr6:31122997 CCHCR1 C - 12 C vs. G 0.033 (G) 0.167 (G) <1 (-) 42 (-) >0.05
rs1634706 chr6:31178289 HCG27 [+6544bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs10947139 chr6:31100160 PSORS1C1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs114119211 chr6:31156985 POU5F1 [+8477bp] C - 12 T vs. G 0.033 (G) 0.233 (G) <1 (-) 38 (-) >0.05
rs9263861 chr6:31158633 HCG27 [-6904bp] C - 12 A vs. G 0.158 (G) - 1 (-) 41 (-) >0.05

Association studies for this region [+]