RAI1, chr17:17584787-17714767 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11868035 chr17:17715101 SREBF1 All: C 120,238 21 A vs. G 0.258 (A) 0.142 (G) 0.94 (0.91-0.97) 40 (0-65) 2.43e-05
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs60410257 chr17:17536919 PEMT [+41897bp] C - 13 T vs. C 0.025 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs73292256 chr17:17599877 RAI1 C - 12 C vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs4925119 chr17:17742904 SREBF1 [+2579bp] C - 13 A vs. G 0.292 (A) 0.125 (G) <1 (-) 0 (-) >0.05
rs58713387 chr17:17603223 RAI1 C - 12 A vs. G 0.017 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs9890330 chr17:17601888 RAI1 C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs71367412 chr17:17621007 RAI1 C - 13 T vs. C 0.283 (T) - >1 (-) 17 (-) >0.05
rs77745346 chr17:17612187 RAI1 C - 13 T vs. C 0.025 (T) - >1 (-) 8 (-) >0.05
rs1108646 chr17:17751478 TOM1L2 C - 13 A vs. G 0.242 (A) 0.092 (G) <1 (-) 5 (-) >0.05
rs16960744 chr17:17755259 TOM1L2 C - 13 A vs. G 0.283 (A) 0.117 (G) <1 (-) 0 (-) >0.05
rs73290131 chr17:17538564 PEMT [+43542bp] C - 13 T vs. C 0.017 (T) 0.292 (T) >1 (-) 0 (-) >0.05
rs59593279 chr17:17653589 RAI1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs141801467 chr17:17608800 RAI1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7225010 chr17:17539065 PEMT [+44043bp] C - 12 A vs. G - - <1 (-) 5 (-) >0.05
rs147618047 chr17:17590680 RAI1 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs12941068 chr17:17737857 SREBF1 C - 13 A vs. G 0.325 (A) - >1 (-) 0 (-) >0.05
rs12938501 chr17:17737258 SREBF1 C - 13 A vs. C 0.292 (A) 0.042 (C) <1 (-) 0 (-) >0.05
rs4925120 chr17:17754633 TOM1L2 C - 13 T vs. C 0.283 (C) 0.117 (T) >1 (-) 0 (-) >0.05
rs9893690 chr17:17753846 TOM1L2 C - 13 A vs. T 0.292 (A) 0.117 (T) <1 (-) 0 (-) >0.05
rs73290118 chr17:17536007 PEMT [+40985bp] C - 13 A vs. G 0.025 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs12946746 chr17:17741669 SREBF1 [+1344bp] C - 13 T vs. C 0.292 (T) 0.05 (C) <1 (-) 0 (-) >0.05
rs7359509 chr17:17741875 SREBF1 [+1550bp] C - 13 A vs. G 0.292 (A) 0.042 (G) <1 (-) 0 (-) >0.05
rs2236513 chr17:17747366 TOM1L2 C - 13 A vs. C 0.283 (A) 0.042 (C) <1 (-) 0 (-) >0.05
rs3183702 chr17:17747289 TOM1L2 C - 13 A vs. G 0.283 (A) 0.042 (G) <1 (-) 0 (-) >0.05
rs73290119 chr17:17536080 PEMT [+41058bp] C - 13 C vs. G 0.025 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs7209194 chr17:17536415 PEMT [+41393bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs7209666 chr17:17536507 PEMT [+41485bp] C - 13 C vs. G 0.025 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs9890324 chr17:17538142 PEMT [+43120bp] C - 13 C vs. G 0.075 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs11078399 chr17:17728983 SREBF1 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12952723 chr17:17731651 SREBF1 C - 13 T vs. C 0.292 (T) 0.042 (C) <1 (-) 0 (-) >0.05
rs147808844 chr17:17536117 PEMT [+41095bp] C - 11 T vs. C - - >1 (-) 48 (-) >0.05
rs4925116 chr17:17731200 SREBF1 C - 13 A vs. G 0.292 (A) 0.042 (G) <1 (-) 0 (-) >0.05
rs8066560 chr17:17728043 SREBF1 C - 13 A vs. G 0.283 (A) 0.108 (G) <1 (-) 0 (-) >0.05
rs4924822 chr17:17748013 TOM1L2 C - 13 A vs. G 0.292 (A) 0.033 (G) <1 (-) 0 (-) >0.05
rs138018405 chr17:17569612 RAI1 [-15175bp] C - 10 A vs. G - - >1 (-) 28 (-) >0.05
rs71367414 chr17:17634550 RAI1 C - 13 T vs. C 0.2 (T) - >1 (-) 18 (-) >0.05
rs9915776 chr17:17749056 TOM1L2 C - 13 A vs. G 0.292 (A) 0.042 (G) <1 (-) 0 (-) >0.05
rs34717629 chr17:17610404 RAI1 C - 13 A vs. G 0.267 (A) - >1 (-) 15 (-) >0.05
rs111650396 chr17:17749872 TOM1L2 C - 5 C vs. G 0.017 (C) - >1 (-) 27 (-) >0.05
rs8078756 chr17:17744725 TOM1L2 [-2103bp] C - 13 T vs. C 0.292 (T) 0.042 (C) <1 (-) 0 (-) >0.05
rs149251763 chr17:17587858 RAI1 C - 10 T vs. G - - >1 (-) 27 (-) >0.05
rs148312833 chr17:17610490 RAI1 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs6502618 chr17:17746741 TOM1L2 [-87bp] C - 13 A vs. G 0.283 (A) - <1 (-) 0 (-) >0.05
rs9915248 chr17:17747514 TOM1L2 C - 13 T vs. C 0.283 (C) - >1 (-) 0 (-) >0.05
rs9894257 chr17:17732319 SREBF1 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs62066219 chr17:17546031 RAI1 [-38756bp] C - 11 A vs. G - - >1 (-) 47 (-) >0.05
rs9899634 chr17:17727943 SREBF1 C - 13 A vs. T 0.292 (T) 0.042 (A) >1 (-) 0 (-) >0.05
rs9891957 chr17:17744439 TOM1L2 [-2389bp] C - 13 A vs. G 0.292 (G) 0.042 (A) >1 (-) 0 (-) >0.05
rs7503747 chr17:17732469 SREBF1 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11657423 chr17:17728574 SREBF1 C - 13 T vs. C 0.292 (T) - <1 (-) 0 (-) >0.05
rs12953299 chr17:17726648 SREBF1 C - 13 A vs. G 0.35 (A) 0.042 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]