RNA5SP443, chr17:43404732-43404863 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17686238 chr17:43417273 RNA5SP443 [+12410bp] All: C 103,235 14 T vs. G 0.067 (T) - 0.76 (0.71-0.81) 0 (0-52) 1.32e-17
Meta_image?name=rs17686238

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17686238 chr17:43417273 RNA5SP443 [+12410bp] All: C 103,235 14 T vs. G 0.067 (T) - 0.76 (0.71-0.81) 0 (0-52) 1.32e-17
rs117642368 chr17:43399058 RNA5SP443 [-5674bp] All: C 108,990 15 C vs. G 0.067 (C) - 0.77 (0.73-0.82) 0 (0-47) 3.08e-16
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
rs7214514 chr17:43387104 RNA5SP443 [-17628bp] All: C 108,990 15 T vs. G 0.275 (T) 0.317 (G) 0.90 (0.87-0.93) 0 (0-38) 1.12e-09
rs4792849 chr17:43395178 RNA5SP443 [-9554bp] All: C 108,990 15 A vs. G 0.225 (A) 0.383 (G) 0.90 (0.86-0.93) 0 (0-32) 2.02e-09
rs721579 chr17:43370481 SPATA32 [+31002bp] All: C 108,990 15 T vs. C 0.225 (T) 0.392 (C) 0.90 (0.86-0.93) 0 (0-41) 3.11e-09
rs10853050 chr17:43445792 ARHGAP27 [-25483bp] All: C 103,235 14 A vs. G 0.242 (A) 0.383 (G) 0.90 (0.86-0.93) 18 (0-56) 2.06e-08
rs1476532 chr17:43383596 RNA5SP443 [-21136bp] All: C 108,990 15 G vs. A 0.417 (G) 0.233 (A) 0.91 (0.88-0.94) 0 (0-40) 8.19e-08
rs4328483 chr17:43401540 RNA5SP443 [-3192bp] All: C 108,990 15 T vs. G 0.367 (T) 0.342 (G) 0.92 (0.89-0.95) 0 (0-25) 3.14e-07
rs4792814 chr17:43403005 RNA5SP443 [-1727bp] All: C 108,990 15 T vs. C 0.358 (T) 0.342 (C) 0.92 (0.89-0.95) 0 (0-22) 5.90e-07
rs4792850 chr17:43403777 RNA5SP443 [-955bp] All: C 108,990 15 A vs. C 0.358 (A) 0.35 (C) 0.92 (0.89-0.95) 0 (0-22) 6.03e-07
rs9908330 chr17:43383100 RNA5SP443 [-21632bp] All: C 108,990 15 G vs. A 0.417 (G) 0.233 (A) 0.92 (0.90-0.95) 0 (0-33) 9.64e-07
rs7221403 chr17:43380666 RNA5SP443 [-24066bp] All: C 108,990 15 C vs. A 0.417 (C) - 0.93 (0.90-0.96) 0 (0-31) 4.45e-06
rs1352312 chr17:43376761 RNA5SP443 [-27971bp] C - 13 T vs. G 0.275 (G) 0.317 (T) >1 (-) 0 (-) <1.00e-04
rs4792847 chr17:43383484 RNA5SP443 [-21248bp] All: C 108,990 15 A vs. G 0.417 (A) 0.125 (G) 0.93 (0.90-0.96) 0 (0-38) 7.71e-06
rs7222094 chr17:43367653 SPATA32 [+28174bp] All: C 108,990 15 C vs. T 0.408 (C) 0.117 (T) 0.94 (0.91-0.97) 0 (0-46) 4.90e-05
rs12449740 chr17:43385349 RNA5SP443 [-19383bp] C - 13 A vs. G 0.417 (A) 0.233 (G) <1 (-) 0 (-) <1.00e-04
rs1000354 chr17:43413451 RNA5SP443 [+8588bp] C - 13 A vs. G 0.225 (A) 0.292 (G) <1 (-) 0 (-) <1.00e-04
rs7216796 chr17:43392208 RNA5SP443 [-12524bp] C - 13 A vs. G 0.417 (G) 0.117 (A) >1 (-) 0 (-) <0.05
rs11869999 chr17:43389726 RNA5SP443 [-15006bp] C - 13 A vs. T 0.417 (T) 0.125 (A) >1 (-) 0 (-) <0.05
rs7207453 chr17:43368262 SPATA32 [+28783bp] C - 5 T vs. C - - <1 (-) 0 (-) <0.05
rs11574819 chr17:43364638 SPATA32 [+25159bp] C - 7 T vs. C - - >1 (-) 49 (-) <0.05
rs2074289 chr17:43364914 SPATA32 [+25435bp] All: C 100,199 13 A vs. G - 0.125 (G) 0.83 (0.74-0.94) 0 (-) 0.003
rs7222450 chr17:43407670 RNA5SP443 [+2807bp] C - 13 A vs. G 0.492 (A) 0.142 (A) >1 (-) 8 (-) <0.05
rs59136196 chr17:43405846 RNA5SP443 [+983bp] C - 9 A vs. G - 0.125 (G) <1 (-) 0 (-) <0.05
rs75719641 chr17:43396077 RNA5SP443 [-8655bp] C - 9 A vs. G - 0.108 (A) >1 (-) 0 (-) <0.05
rs146416640 chr17:43359799 SPATA32 [+20320bp] C - 4 A vs. G - - <1 (-) 0 (-) <0.05
rs74996617 chr17:43390343 RNA5SP443 [-14389bp] All: C 96,250 12 G vs. A - 0.117 (A) 0.81 (0.69-0.95) 0 (-) 0.009
rs79760062 chr17:43390763 RNA5SP443 [-13969bp] All: C 96,250 12 A vs. G - 0.108 (G) 0.81 (0.69-0.95) 0 (-) 0.009
rs80000929 chr17:43390121 RNA5SP443 [-14611bp] All: C 96,250 12 G vs. A - 0.1 (A) 0.81 (0.69-0.95) 0 (-) 0.010
rs12942865 chr17:43450474 ARHGAP27 [-20801bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs16939958 chr17:43400747 RNA5SP443 [-3985bp] C - 10 T vs. C - 0.125 (T) >1 (-) 0 (-) <0.05
rs9895292 chr17:43437346 RNA5SP443 [+32483bp] C - 12 A vs. T - - >1 (-) 11 (-) <0.05
rs4792813 chr17:43375239 RNA5SP443 [-29493bp] C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs11574814 chr17:43367424 SPATA32 [+27945bp] C - 13 T vs. C 0.233 (T) 0.025 (T) >1 (-) 0 (-) <0.05
rs76853696 chr17:43398594 RNA5SP443 [-6138bp] C - 10 T vs. C - 0.125 (T) >1 (-) 0 (-) <0.05
rs4792848 chr17:43391328 RNA5SP443 [-13404bp] C - 10 T vs. G - 0.108 (T) >1 (-) 0 (-) <0.05
rs78530059 chr17:43400563 RNA5SP443 [-4169bp] C - 10 C vs. G - 0.125 (G) <1 (-) 0 (-) <0.05
rs74253619 chr17:43384345 RNA5SP443 [-20387bp] C - 10 T vs. C - 0.1 (T) >1 (-) 0 (-) <0.05
rs77566261 chr17:43409429 RNA5SP443 [+4566bp] C - 10 C vs. G - 0.125 (G) <1 (-) 0 (-) <0.05
rs57079292 chr17:43405520 RNA5SP443 [+657bp] C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs16939961 chr17:43401748 RNA5SP443 [-2984bp] C - 10 T vs. C - 0.125 (T) >1 (-) 0 (-) <0.05
rs62064591 chr17:43421359 RNA5SP443 [+16496bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs143006871 chr17:43450305 ARHGAP27 [-20970bp] C - 9 T vs. C - - >1 (-) 9 (-) <0.05
rs117350379 chr17:43395013 RNA5SP443 [-9719bp] C - 10 T vs. C 0.05 (C) - <1 (-) 15 (-) <0.05
rs17686001 chr17:43388413 RNA5SP443 [-16319bp] C - 13 A vs. G 0.233 (A) - >1 (-) 0 (-) <0.05
rs145519256 chr17:43424590 RNA5SP443 [+19727bp] C - 9 T vs. G - - <1 (-) 47 (-) <0.05
rs117574138 chr17:43449181 ARHGAP27 [-22094bp] C - 12 C vs. G 0.075 (G) - <1 (-) 1 (-) <0.05
rs114502984 chr17:43391482 RNA5SP443 [-13250bp] C - 8 A vs. G - - <1 (-) 32 (-) <0.05
rs113772413 chr17:43357804 SPATA32 [+18325bp] C - 10 C vs. G - - >1 (-) 0 (-) <0.05

Association studies for this region [+]