SPATA32, chr17:43331760-43339479 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
Meta_image?name=rs2867316

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
rs7214514 chr17:43387104 RNA5SP443 [-17628bp] All: C 108,990 15 T vs. G 0.275 (T) 0.317 (G) 0.90 (0.87-0.93) 0 (0-38) 1.12e-09
rs721579 chr17:43370481 SPATA32 [+31002bp] All: C 108,990 15 T vs. C 0.225 (T) 0.392 (C) 0.90 (0.86-0.93) 0 (0-41) 3.11e-09
rs1476532 chr17:43383596 RNA5SP443 [-21136bp] All: C 108,990 15 G vs. A 0.417 (G) 0.233 (A) 0.91 (0.88-0.94) 0 (0-40) 8.19e-08
rs9908330 chr17:43383100 RNA5SP443 [-21632bp] All: C 108,990 15 G vs. A 0.417 (G) 0.233 (A) 0.92 (0.90-0.95) 0 (0-33) 9.64e-07
rs7221403 chr17:43380666 RNA5SP443 [-24066bp] All: C 108,990 15 C vs. A 0.417 (C) - 0.93 (0.90-0.96) 0 (0-31) 4.45e-06
rs1352312 chr17:43376761 RNA5SP443 [-27971bp] C - 13 T vs. G 0.275 (G) 0.317 (T) >1 (-) 0 (-) <1.00e-04
rs4792847 chr17:43383484 RNA5SP443 [-21248bp] All: C 108,990 15 A vs. G 0.417 (A) 0.125 (G) 0.93 (0.90-0.96) 0 (0-38) 7.71e-06
rs7222094 chr17:43367653 SPATA32 [+28174bp] All: C 108,990 15 C vs. T 0.408 (C) 0.117 (T) 0.94 (0.91-0.97) 0 (0-46) 4.90e-05
rs12449740 chr17:43385349 RNA5SP443 [-19383bp] C - 13 A vs. G 0.417 (A) 0.233 (G) <1 (-) 0 (-) <1.00e-04
rs140338623 chr17:43294873 FMNL1 [-3938bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs7207453 chr17:43368262 SPATA32 [+28783bp] C - 5 T vs. C - - <1 (-) 0 (-) <0.05
rs11574819 chr17:43364638 SPATA32 [+25159bp] C - 7 T vs. C - - >1 (-) 49 (-) <0.05
rs2074289 chr17:43364914 SPATA32 [+25435bp] All: C 100,199 13 A vs. G - 0.125 (G) 0.83 (0.74-0.94) 0 (-) 0.003
rs62066713 chr17:43285302 FMNL1 [-13509bp] C - 11 T vs. G 0.033 (G) - <1 (-) 0 (-) <0.05
rs111858497 chr17:43282726 FMNL1 [-16085bp] C - 11 A vs. C - - >1 (-) 0 (-) <0.05
rs55706568 chr17:43292035 FMNL1 [-6776bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs62066715 chr17:43288734 FMNL1 [-10077bp] C - 11 A vs. G 0.008 (A) - >1 (-) 0 (-) <0.05
rs62066719 chr17:43302680 FMNL1 C - 11 A vs. G 0.025 (G) - <1 (-) 0 (-) <0.05
rs62066716 chr17:43289187 FMNL1 [-9624bp] C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs12449792 chr17:43302259 FMNL1 C - 13 T vs. C 0.467 (T) 0.308 (T) <1 (-) 0 (-) <0.05
rs7217315 chr17:43295429 FMNL1 [-3382bp] C - 11 A vs. G - - >1 (-) 0 (-) <0.05
rs113819830 chr17:43292279 FMNL1 [-6532bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs146416640 chr17:43359799 SPATA32 [+20320bp] C - 4 A vs. G - - <1 (-) 0 (-) <0.05
rs12453617 chr17:43283508 FMNL1 [-15303bp] C - 13 T vs. C 0.342 (T) 0.217 (T) <1 (-) 0 (-) <0.05
rs76397059 chr17:43330645 SPATA32 [-1115bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs62066718 chr17:43300927 FMNL1 C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs4792813 chr17:43375239 RNA5SP443 [-29493bp] C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs12603585 chr17:43288110 FMNL1 [-10701bp] C - 13 A vs. C 0.425 (A) 0.283 (A) <1 (-) 0 (-) <0.05
rs11574814 chr17:43367424 SPATA32 [+27945bp] C - 13 T vs. C 0.233 (T) 0.025 (T) >1 (-) 0 (-) <0.05
rs11079501 chr17:43349882 SPATA32 [+10403bp] All: C 96,250 12 T vs. C - 0.125 (C) 0.82 (0.69-0.96) 0 (-) 0.017
rs74253619 chr17:43384345 RNA5SP443 [-20387bp] C - 10 T vs. C - 0.1 (T) >1 (-) 0 (-) <0.05
rs62066714 chr17:43287642 FMNL1 [-11169bp] C - 13 T vs. G 0.425 (T) 0.283 (T) <1 (-) 0 (-) <0.05
rs11870777 chr17:43285691 FMNL1 [-13120bp] C - 13 A vs. C 0.408 (C) 0.267 (C) >1 (-) 0 (-) <0.05
rs12603483 chr17:43288222 FMNL1 [-10589bp] C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs1023995 chr17:43316520 FMNL1 C - 13 T vs. C 0.392 (T) 0.45 (T) >1 (-) 27 (-) <0.05
rs4986147 chr17:43282545 FMNL1 [-16266bp] C - 9 A vs. G - - >1 (-) 0 (-) <0.05
rs17686001 chr17:43388413 RNA5SP443 [-16319bp] C - 13 A vs. G 0.233 (A) - >1 (-) 0 (-) <0.05
rs62066728 chr17:43335876 SPATA32 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs147281184 chr17:43322766 FMNL1 C - 6 A vs. G - - <1 (-) 0 (-) <0.05
rs11574826 chr17:43351039 SPATA32 [+11560bp] C - 10 C vs. G - 0.125 (G) <1 (-) 0 (-) <0.05
rs113896299 chr17:43354617 SPATA32 [+15138bp] C - 10 T vs. C - - >1 (-) 0 (-) <0.05
rs113772413 chr17:43357804 SPATA32 [+18325bp] C - 10 C vs. G - - >1 (-) 0 (-) <0.05
rs11574828 chr17:43350081 SPATA32 [+10602bp] C - 10 T vs. C - 0.125 (T) >1 (-) 0 (-) <0.05
rs3785805 chr17:43360940 SPATA32 [+21461bp] C - 10 T vs. G - 0.125 (T) >1 (-) 0 (-) <0.05
rs144855522 chr17:43295973 FMNL1 [-2838bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs117687464 chr17:43297152 FMNL1 [-1659bp] C - 12 A vs. G 0.025 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs16939953 chr17:43368600 SPATA32 [+29121bp] C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs57825815 chr17:43297297 FMNL1 [-1514bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs34207275 chr17:43281926 FMNL1 [-16885bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05

Association studies for this region [+]