RNA5SP443, chr17:43404732-43404863 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17686238 chr17:43417273 RNA5SP443 [+12410bp] All: C 103,235 14 T vs. G 0.067 (T) - 0.76 (0.71-0.81) 0 (0-52) 1.32e-17
Meta_image?name=rs17686238

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3785805 chr17:43360940 SPATA32 [+21461bp] C - 10 T vs. G - 0.125 (T) >1 (-) 0 (-) <0.05
rs56265946 chr17:43444133 ARHGAP27 [-27142bp] C - 12 T vs. C 0.117 (T) 0.083 (T) >1 (-) 0 (-) <0.05
rs60221345 chr17:43434386 RNA5SP443 [+29523bp] C - 12 T vs. C 0.392 (T) 0.208 (T) >1 (-) 0 (-) <0.05
rs59193782 chr17:43434565 RNA5SP443 [+29702bp] C - 12 T vs. G - - <1 (-) 0 (-) <0.05
rs16939953 chr17:43368600 SPATA32 [+29121bp] C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs34271337 chr17:43450678 ARHGAP27 [-20597bp] C - 12 T vs. C 0.117 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs6503435 chr17:43445484 ARHGAP27 [-25791bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7222377 chr17:43436472 RNA5SP443 [+31609bp] C - 12 A vs. T 0.392 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs12943205 chr17:43448317 ARHGAP27 [-22958bp] C - 12 A vs. G 0.117 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs11079524 chr17:43428218 RNA5SP443 [+23355bp] C - 12 T vs. C 0.417 (C) 0.35 (C) <1 (-) 0 (-) >0.05
rs147904962 chr17:43454537 ARHGAP27 [-16738bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs117683720 chr17:43452908 ARHGAP27 [-18367bp] C - 12 C vs. G 0.033 (G) - >1 (-) 18 (-) >0.05
rs4792851 chr17:43422855 RNA5SP443 [+17992bp] C - 12 T vs. C 0.4 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs67622136 chr17:43452519 ARHGAP27 [-18756bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs11574812 chr17:43369980 SPATA32 [+30501bp] C - 12 C vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs7214661 chr17:43430696 RNA5SP443 [+25833bp] C - 12 A vs. G 0.392 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs79620933 chr17:43418841 RNA5SP443 [+13978bp] C - 9 T vs. C 0.017 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs140245332 chr17:43437308 RNA5SP443 [+32445bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs12944705 chr17:43436791 RNA5SP443 [+31928bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs36121378 chr17:43435277 RNA5SP443 [+30414bp] C - 12 T vs. C 0.108 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs12952171 chr17:43437328 RNA5SP443 [+32465bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs79206700 chr17:43445610 ARHGAP27 [-25665bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs867139 chr17:43454804 ARHGAP27 [-16471bp] C - 12 C vs. G 0.125 (G) 0.092 (G) <1 (-) 0 (-) >0.05
rs12453351 chr17:43431779 RNA5SP443 [+26916bp] C - 12 A vs. G - - <1 (-) 36 (-) >0.05
rs12945838 chr17:43438430 ARHGAP27 [-32845bp] C - 12 A vs. G 0.108 (G) 0.083 (G) <1 (-) 0 (-) >0.05
rs36057737 chr17:43427544 RNA5SP443 [+22681bp] C - 12 A vs. G 0.108 (A) - >1 (-) 2 (-) >0.05
rs77691084 chr17:43382008 RNA5SP443 [-22724bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs114305838 chr17:43385086 RNA5SP443 [-19646bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs72832896 chr17:43421720 RNA5SP443 [+16857bp] C - 12 A vs. G 0.15 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs116876168 chr17:43429315 RNA5SP443 [+24452bp] C - 10 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs116060029 chr17:43415262 RNA5SP443 [+10399bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs143427885 chr17:43426576 RNA5SP443 [+21713bp] C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs146658688 chr17:43447694 ARHGAP27 [-23581bp] C - 3 T vs. C - - >1 (-) 11 (-) >0.05
rs12952082 chr17:43437238 RNA5SP443 [+32375bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs16939964 chr17:43423890 RNA5SP443 [+19027bp] C - 12 T vs. C 0.108 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs143738909 chr17:43389799 RNA5SP443 [-14933bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs149496255 chr17:43377001 RNA5SP443 [-27731bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs4792846 chr17:43367152 SPATA32 [+27673bp] C - 13 A vs. G 0.475 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs79795624 chr17:43376143 RNA5SP443 [-28589bp] C - 8 C vs. G - - >1 (-) 0 (-) >0.05
rs34066137 chr17:43365015 SPATA32 [+25536bp] C - 13 A vs. G 0.05 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs12949988 chr17:43437241 RNA5SP443 [+32378bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs12938138 chr17:43381472 RNA5SP443 [-23260bp] C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs7207549 chr17:43360128 SPATA32 [+20649bp] C - 13 A vs. G 0.317 (A) 0.108 (A) >1 (-) 0 (-) >0.05
rs17759555 chr17:43417995 RNA5SP443 [+13132bp] C - 12 A vs. C 0.283 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs117573357 chr17:43410801 RNA5SP443 [+5938bp] C - 6 A vs. C 0.017 (C) - <1 (-) 27 (-) >0.05
rs1985556 chr17:43359241 SPATA32 [+19762bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs58299347 chr17:43451359 ARHGAP27 [-19916bp] C - 12 T vs. C 0.275 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs2074291 chr17:43361889 SPATA32 [+22410bp] C - 13 A vs. C 0.483 (A) 0.4 (C) <1 (-) 0 (-) >0.05
rs4792853 chr17:43432801 RNA5SP443 [+27938bp] C - 9 A vs. G 0.042 (A) 0.058 (A) >1 (-) 0 (-) >0.05
rs2074292 chr17:43361491 SPATA32 [+22012bp] C - 13 A vs. G 0.492 (A) 0.417 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]