RNA5SP443, chr17:43404732-43404863 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17686238 chr17:43417273 RNA5SP443 [+12410bp] All: C 103,235 14 T vs. G 0.067 (T) - 0.76 (0.71-0.81) 0 (0-52) 1.32e-17
Meta_image?name=rs17686238

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4792842 chr17:43360057 SPATA32 [+20578bp] C - 13 A vs. G 0.492 (A) 0.408 (G) <1 (-) 0 (-) >0.05
rs116346140 chr17:43408145 RNA5SP443 [+3282bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs116198640 chr17:43416063 RNA5SP443 [+11200bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs34198001 chr17:43357938 SPATA32 [+18459bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs16939948 chr17:43358418 SPATA32 [+18939bp] C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs12452272 chr17:43424214 RNA5SP443 [+19351bp] C - 12 A vs. C 0.258 (A) 0.125 (A) >1 (-) 5 (-) >0.05
rs138215199 chr17:43445515 ARHGAP27 [-25760bp] C - 8 T vs. C - - >1 (-) 10 (-) >0.05
rs112120661 chr17:43430388 RNA5SP443 [+25525bp] C - 12 T vs. C - - >1 (-) 2 (-) >0.05
rs56049236 chr17:43402852 RNA5SP443 [-1880bp] C - 10 A vs. G - - >1 (-) 5 (-) >0.05
rs8067829 chr17:43417810 RNA5SP443 [+12947bp] C - 3 T vs. C - - >1 (-) 38 (-) >0.05
rs141599083 chr17:43435430 RNA5SP443 [+30567bp] C - 6 A vs. G - - >1 (-) 34 (-) >0.05
rs9908076 chr17:43376110 RNA5SP443 [-28622bp] C - 13 T vs. C 0.05 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs148255010 chr17:43426306 RNA5SP443 [+21443bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs115175676 chr17:43407607 RNA5SP443 [+2744bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs116979783 chr17:43398535 RNA5SP443 [-6197bp] C - 10 T vs. C 0.017 (C) - <1 (-) 5 (-) >0.05
rs11657021 chr17:43378701 RNA5SP443 [-26031bp] C - 7 T vs. C - - <1 (-) 33 (-) >0.05
rs59113655 chr17:43434595 RNA5SP443 [+29732bp] C - 12 T vs. C - - <1 (-) 5 (-) >0.05
rs117626672 chr17:43398124 RNA5SP443 [-6608bp] C - 9 A vs. G 0.017 (A) - >1 (-) 59 (-) >0.05
rs118150876 chr17:43438776 ARHGAP27 [-32499bp] C - 8 T vs. C 0.025 (T) - >1 (-) 11 (-) >0.05
rs144769640 chr17:43425927 RNA5SP443 [+21064bp] C - 5 T vs. G - - <1 (-) 19 (-) >0.05
rs117074068 chr17:43395255 RNA5SP443 [-9477bp] C - 8 T vs. G 0.017 (G) - <1 (-) 5 (-) >0.05
rs150820346 chr17:43438840 ARHGAP27 [-32435bp] C - 5 C vs. G - - >1 (-) 21 (-) >0.05
rs117640223 chr17:43390171 RNA5SP443 [-14561bp] C - 7 C vs. G 0.025 (C) - >1 (-) 8 (-) >0.05
rs137879571 chr17:43393543 RNA5SP443 [-11189bp] C - 3 T vs. C - - >1 (-) 58 (-) >0.05
rs145854920 chr17:43441980 ARHGAP27 [-29295bp] C - 9 A vs. C - - >1 (-) 0 (-) >0.05
rs57804037 chr17:43405024 RNA5SP443 [+161bp] C - 13 T vs. C 0.092 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs116054740 chr17:43419848 RNA5SP443 [+14985bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs117421612 chr17:43423162 RNA5SP443 [+18299bp] C - 10 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs143514046 chr17:43440974 ARHGAP27 [-30301bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs147610568 chr17:43355096 SPATA32 [+15617bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs142966231 chr17:43376506 RNA5SP443 [-28226bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs139159969 chr17:43443653 ARHGAP27 [-27622bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs117274767 chr17:43426386 RNA5SP443 [+21523bp] C - 7 T vs. G - 0.058 (T) <1 (-) 24 (-) >0.05
rs80335384 chr17:43398618 RNA5SP443 [-6114bp] C - 8 A vs. G 0.05 (A) - <1 (-) 6 (-) >0.05
rs148133422 chr17:43410584 RNA5SP443 [+5721bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs7222751 chr17:43354930 SPATA32 [+15451bp] C - 13 A vs. G 0.142 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs79084945 chr17:43424018 RNA5SP443 [+19155bp] C - 11 A vs. G 0.033 (A) 0.158 (A) >1 (-) 52 (-) >0.05
rs11574824 chr17:43361298 SPATA32 [+21819bp] C - 10 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs67170803 chr17:43415383 RNA5SP443 [+10520bp] C - 12 A vs. C 0.108 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs35771499 chr17:43453065 ARHGAP27 [-18210bp] C - 4 C vs. G 0.008 (C) - <1 (-) 37 (-) >0.05
rs141018344 chr17:43383506 RNA5SP443 [-21226bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs9907503 chr17:43421115 RNA5SP443 [+16252bp] C - 12 T vs. C 0.117 (C) 0.083 (C) <1 (-) 0 (-) >0.05
rs12942322 chr17:43421431 RNA5SP443 [+16568bp] C - 10 T vs. C 0.225 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs150787397 chr17:43370304 SPATA32 [+30825bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs144505970 chr17:43373455 RNA5SP443 [-31277bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs3785803 chr17:43361213 SPATA32 [+21734bp] C - 13 A vs. G 0.133 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs35971701 chr17:43359891 SPATA32 [+20412bp] C - 13 T vs. C 0.2 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs3785804 chr17:43360994 SPATA32 [+21515bp] C - 13 A vs. G 0.142 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs149282725 chr17:43421928 RNA5SP443 [+17065bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs34339831 chr17:43363372 SPATA32 [+23893bp] C - 10 C vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]