RNU6-1133P, chr6:31050787-31050886 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2517503 chr6:31032407 RNU6-1133P [-18380bp] C - 12 A vs. C - - >1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2517503 chr6:31032407 RNU6-1133P [-18380bp] C - 12 A vs. C - - >1 (-) 0 (-) <1.00e-04
rs2256962 chr6:31065620 C6orf15 [-13380bp] C - 12 A vs. G 0.108 (A) 0.0 (A) >1 (-) 7 (-) <1.00e-04
rs34507986 chr6:31052361 RNU6-1133P [+1475bp] All: C 103,235 14 G vs. A - - 1.19 (1.09-1.29) 39 (0-67) 5.81e-05
rs3130967 chr6:31063413 RNU6-1133P [+12527bp] All: C 103,235 14 C vs. T - - 0.88 (0.83-0.94) 26 (0-61) 1.02e-04
rs35944195 chr6:31074829 C6orf15 [-4171bp] All: C 103,235 14 T vs. C 0.092 (T) 0.117 (T) 0.89 (0.84-0.95) 18 (0-56) 2.07e-04
rs34416364 chr6:31003469 MUC22 [+290bp] All: C 103,235 14 G vs. A - - 1.11 (1.05-1.18) 1 (0-55) 2.48e-04
rs2517438 chr6:31064100 RNU6-1133P [+13214bp] All: C 103,235 14 T vs. C 0.075 (T) 0.0 (T) 1.13 (1.06-1.20) 3 (0-57) 2.86e-04
rs3869098 chr6:31002452 MUC22 All: C 103,235 14 G vs. A 0.475 (G) 0.342 (A) 0.94 (0.91-0.98) 0 (0-46) 5.27e-04
rs2517521 chr6:31027336 RNU6-1133P [-23451bp] C - 12 A vs. G 0.158 (A) 0.042 (A) >1 (-) 0 (-) <0.05
rs9263671 chr6:31087305 PSORS1C1 C - 12 T vs. C 0.158 (T) 0.05 (T) >1 (-) 22 (-) <0.05
rs2517559 chr6:31068525 C6orf15 [-10475bp] C - 12 A vs. C 0.142 (A) 0.042 (A) >1 (-) 8 (-) <0.05
rs4248153 chr6:31002527 MUC22 All: C 103,235 14 G vs. A 0.383 (G) 0.492 (A) 0.95 (0.91-0.98) 0 (-) 9.92e-04
rs3132567 chr6:31035191 RNU6-1133P [-15596bp] C - 12 T vs. G - - >1 (-) 0 (-) <0.05
rs3130539 chr6:31035634 RNU6-1133P [-15153bp] C - 12 C vs. G - - <1 (-) 0 (-) <0.05
rs2535298 chr6:31059462 RNU6-1133P [+8576bp] C - 12 A vs. G 0.192 (G) 0.1 (G) <1 (-) 0 (-) <0.05
rs3095304 chr6:31092767 PSORS1C1 C - 12 T vs. C 0.208 (T) 0.125 (T) >1 (-) 0 (-) <0.05
rs2844670 chr6:31005726 MUC22 [+2547bp] C - 12 A vs. G 0.167 (G) 0.258 (G) <1 (-) 0 (-) <0.05
rs2517494 chr6:31073597 C6orf15 [-5403bp] C - 12 C vs. G - - >1 (-) 0 (-) <0.05
rs3131008 chr6:31098381 PSORS1C1 C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs79499809 chr6:31081485 PSORS1C1 [-1042bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs3095309 chr6:31091475 PSORS1C1 C - 12 T vs. C 0.433 (T) 0.242 (T) >1 (-) 28 (-) <0.05
rs77478237 chr6:31004053 MUC22 [+874bp] C - 10 A vs. G - - <1 (-) 21 (-) <0.05
rs9263672 chr6:31087310 PSORS1C1 C - 12 T vs. C 0.317 (T) 0.217 (T) >1 (-) 7 (-) <0.05
rs79118933 chr6:31005354 MUC22 [+2175bp] C - 10 A vs. C - 0.033 (C) <1 (-) 21 (-) <0.05
rs3130984 chr6:31084964 PSORS1C1 C - 11 T vs. C 0.283 (T) 0.125 (T) >1 (-) 8 (-) <0.05
rs76610133 chr6:31007530 MUC22 [+4351bp] C - 10 T vs. C 0.008 (T) 0.033 (T) >1 (-) 0 (-) <0.05
rs3130981 chr6:31083813 PSORS1C1 C - 12 T vs. C 0.283 (T) 0.125 (T) >1 (-) 2 (-) <0.05
rs2239519 chr6:31088856 PSORS1C1 C - 12 T vs. C 0.283 (T) - >1 (-) 2 (-) >0.05
rs1042148 chr6:31083107 PSORS1C1 C - 12 T vs. C 0.292 (T) 0.125 (T) >1 (-) 1 (-) >0.05
rs3132555 chr6:31082910 PSORS1C1 C - 12 C vs. G 0.292 (C) 0.125 (C) >1 (-) 2 (-) >0.05
rs2239523 chr6:31089507 PSORS1C1 C - 12 C vs. G 0.283 (C) 0.125 (C) >1 (-) 4 (-) >0.05
rs2844683 chr6:31003436 MUC22 [+257bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs3132551 chr6:31085882 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.217 (A) >1 (-) 1 (-) >0.05
rs3132552 chr6:31085269 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.125 (A) >1 (-) 2 (-) >0.05
rs3095323 chr6:31087240 PSORS1C1 C - 12 T vs. C 0.283 (C) 0.217 (C) <1 (-) 2 (-) >0.05
rs3095319 chr6:31088037 PSORS1C1 C - 12 T vs. C 0.3 (T) 0.225 (T) >1 (-) 3 (-) >0.05
rs3132547 chr6:31087908 PSORS1C1 C - 12 T vs. G 0.283 (T) 0.208 (T) >1 (-) 3 (-) >0.05
rs75407132 chr6:31015358 MUC22 [+12179bp] C - 9 T vs. G - - <1 (-) 20 (-) >0.05
rs3095322 chr6:31087441 PSORS1C1 C - 12 T vs. C - - >1 (-) 2 (-) >0.05
rs3132549 chr6:31086849 PSORS1C1 C - 12 A vs. G - - >1 (-) 1 (-) >0.05
rs3132548 chr6:31086884 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.125 (A) >1 (-) 1 (-) >0.05
rs41290833 chr6:31010047 MUC22 [+6868bp] C - 9 T vs. C - - >1 (-) 21 (-) >0.05
rs3095320 chr6:31087934 PSORS1C1 C - 12 A vs. G 0.283 (G) 0.217 (G) <1 (-) 4 (-) >0.05
rs3094211 chr6:31086402 PSORS1C1 C - 12 A vs. G 0.283 (G) 0.217 (G) <1 (-) 1 (-) >0.05
rs3094209 chr6:31089982 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.117 (A) >1 (-) 8 (-) >0.05
rs62399064 chr6:31037176 RNU6-1133P [-13611bp] C - 7 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs3095321 chr6:31087496 PSORS1C1 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs3132553 chr6:31085200 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.125 (A) >1 (-) 3 (-) >0.05
rs3132545 chr6:31089125 PSORS1C1 C - 12 A vs. G 0.283 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs2302397 chr6:31088241 PSORS1C1 C - 12 T vs. C 0.283 (C) 0.2 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]