SHC1, chr1:154934774-154946871 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71628639 chr1:154988255 ZBTB7B All: C 99,075 12 C vs. A - - 0.59 (0.51-0.68) 0 (0-12) 1.62e-13
Meta_image?name=rs71628639

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11589126 chr1:154899673 PMVK C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs11581175 chr1:154908258 PMVK C - 13 A vs. C 0.042 (A) - >1 (-) 34 (-) >0.05
rs7543051 chr1:154905179 PMVK C - 13 A vs. G 0.05 (G) - <1 (-) 35 (-) >0.05
rs1891805 chr1:154904840 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs6689022 chr1:154904230 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs12087657 chr1:154948327 CKS1B C - 13 T vs. G 0.333 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs11264286 chr1:154903047 PMVK C - 13 A vs. G 0.05 (A) - >1 (-) 35 (-) >0.05
rs11264287 chr1:154903583 PMVK C - 13 T vs. C 0.05 (T) - >1 (-) 35 (-) >0.05
rs7539805 chr1:154903921 PMVK C - 13 T vs. C 0.05 (C) - <1 (-) 35 (-) >0.05
rs149026539 chr1:154889053 PMVK [-8157bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs148800700 chr1:154915278 PBXIP1 [-1274bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs74116247 chr1:154899536 PMVK C - 13 T vs. G 0.025 (T) - >1 (-) 0 (-) >0.05
rs77715381 chr1:154888198 PMVK [-9012bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs151107921 chr1:154892388 PMVK [-4822bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs147942152 chr1:154886509 PMVK [-10701bp] C - 3 A vs. G - - >1 (-) 37 (-) >0.05
rs3820225 chr1:154986793 ZBTB7B C - 13 T vs. C 0.483 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs78672559 chr1:154900442 PMVK C - 4 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs78431420 chr1:154929408 PYGO2 [-94bp] C - 10 T vs. G 0.017 (T) - <1 (-) 0 (-) >0.05
rs56720968 chr1:154900134 PMVK C - 13 A vs. G 0.025 (A) - >1 (-) 16 (-) >0.05
rs115341134 chr1:154909748 PMVK [+281bp] C - 13 C vs. G 0.008 (C) - >1 (-) 0 (-) >0.05
rs114951074 chr1:154903917 PMVK C - 8 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs7551495 chr1:154899864 PMVK C - 13 C vs. G 0.042 (C) - >1 (-) 14 (-) >0.05
rs2211498 chr1:154896032 PMVK [-1178bp] C - 13 A vs. G 0.042 (G) - <1 (-) 14 (-) >0.05
rs16836521 chr1:154895404 PMVK [-1806bp] C - 13 A vs. G 0.042 (G) - <1 (-) 14 (-) >0.05
rs55887894 chr1:154894917 PMVK [-2293bp] C - 13 A vs. G 0.042 (A) - >1 (-) 13 (-) >0.05
rs72702218 chr1:154907129 PMVK C - 10 T vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs6686021 chr1:154983539 ZBTB7B C - 13 T vs. C 0.45 (T) 0.183 (C) >1 (-) 0 (-) >0.05
rs1218592 chr1:154889485 PMVK [-7725bp] C - 13 A vs. C 0.217 (C) 0.008 (C) <1 (-) 0 (-) >0.05
rs148118871 chr1:154921857 PBXIP1 C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs4845701 chr1:154992955 DCST2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs55692044 chr1:154943356 SHC1 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs138981684 chr1:154961803 FLAD1 C - 10 C vs. G - - <1 (-) 23 (-) >0.05
rs77880932 chr1:154919160 PBXIP1 C - 12 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs2242194 chr1:154990297 ZBTB7B C - 13 C vs. G 0.408 (G) 0.092 (C) <1 (-) 0 (-) >0.05
rs78605519 chr1:154930303 PYGO2 C - 10 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs148566496 chr1:154892114 PMVK [-5096bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs112745976 chr1:154996815 DCST2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs4845696 chr1:154911922 PMVK [+2455bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs705094 chr1:154917314 PBXIP1 C - 13 A vs. G 0.433 (A) 0.117 (G) >1 (-) 0 (-) >0.05
rs77020527 chr1:154970659 LENEP [+3868bp] C - 13 C vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs2335408 chr1:154915977 PBXIP1 [-575bp] C - 13 A vs. G 0.442 (A) 0.117 (G) >1 (-) 0 (-) >0.05
rs2102423 chr1:154916068 PBXIP1 [-484bp] C - 13 A vs. G 0.442 (G) 0.092 (A) <1 (-) 0 (-) >0.05
rs114503518 chr1:154964954 FLAD1 C - 13 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs3738026 chr1:154919565 PBXIP1 C - 13 A vs. G 0.442 (G) 0.117 (A) <1 (-) 0 (-) >0.05
rs4845692 chr1:154890311 PMVK [-6899bp] C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs10796935 chr1:154891363 PMVK [-5847bp] C - 13 T vs. G 0.442 (T) 0.117 (G) >1 (-) 0 (-) >0.05
rs6686873 chr1:154913404 PBXIP1 [-3148bp] C - 13 C vs. G 0.442 (G) 0.117 (C) <1 (-) 0 (-) >0.05
rs12406380 chr1:154890661 PMVK [-6549bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs11264290 chr1:154912300 PMVK [+2833bp] C - 13 T vs. C 0.442 (T) 0.117 (C) >1 (-) 0 (-) >0.05
chr1:154954680 chr1:154954680 FLAD1 [-1134bp] C - 9 A vs. C - - >1 (-) 6 (-) >0.05

Association studies for this region [+]