SPATA32, chr17:43331760-43339479 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
Meta_image?name=rs2867316

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77119221 chr17:43334353 SPATA32 C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs11574812 chr17:43369980 SPATA32 [+30501bp] C - 12 C vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs3178151 chr17:43347066 SPATA32 [+7587bp] C - 10 T vs. C - 0.133 (C) <1 (-) 0 (-) >0.05
rs72832885 chr17:43334228 SPATA32 C - 10 T vs. C 0.025 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs72832878 chr17:43282322 FMNL1 [-16489bp] C - 9 A vs. G 0.017 (A) - >1 (-) 13 (-) >0.05
rs4248280 chr17:43334978 SPATA32 C - 13 C vs. G 0.475 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs58314091 chr17:43334653 SPATA32 C - 13 T vs. C 0.408 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs60163605 chr17:43334649 SPATA32 C - 13 A vs. C 0.408 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs9908267 chr17:43334005 SPATA32 C - 13 C vs. G 0.425 (C) 0.317 (C) <1 (-) 0 (-) >0.05
rs2074293 chr17:43344073 SPATA32 [+4594bp] C - 13 A vs. G 0.442 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs75468347 chr17:43301858 FMNL1 C - 11 A vs. C 0.025 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs77691084 chr17:43382008 RNA5SP443 [-22724bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs114305838 chr17:43385086 RNA5SP443 [-19646bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs11651968 chr17:43333125 SPATA32 C - 13 T vs. C 0.383 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs146584409 chr17:43301118 FMNL1 C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs1552457 chr17:43300669 FMNL1 C - 13 T vs. G 0.408 (T) 0.217 (T) >1 (-) 28 (-) >0.05
rs117103308 chr17:43334499 SPATA32 C - 10 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs149496255 chr17:43377001 RNA5SP443 [-27731bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs1552458 chr17:43298388 FMNL1 [-423bp] C - 13 A vs. G 0.425 (A) 0.225 (A) >1 (-) 27 (-) >0.05
rs7215764 chr17:43338941 SPATA32 C - 13 C vs. G 0.3 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs4792846 chr17:43367152 SPATA32 [+27673bp] C - 13 A vs. G 0.475 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs60823899 chr17:43316642 FMNL1 C - 11 C vs. G 0.025 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs58605696 chr17:43304034 FMNL1 C - 11 T vs. C - 0.258 (T) >1 (-) 0 (-) >0.05
rs74894402 chr17:43320366 FMNL1 C - 11 A vs. G - 0.275 (G) <1 (-) 0 (-) >0.05
rs79795624 chr17:43376143 RNA5SP443 [-28589bp] C - 8 C vs. G - - >1 (-) 0 (-) >0.05
rs16939911 chr17:43290265 FMNL1 [-8546bp] C - 12 T vs. C - - >1 (-) 13 (-) >0.05
rs7214310 chr17:43281946 FMNL1 [-16865bp] C - 13 T vs. C 0.475 (T) - <1 (-) 29 (-) >0.05
rs34066137 chr17:43365015 SPATA32 [+25536bp] C - 13 A vs. G 0.05 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs56276534 chr17:43335413 SPATA32 C - 13 T vs. C 0.467 (C) 0.408 (T) >1 (-) 0 (-) >0.05
rs138296987 chr17:43321538 FMNL1 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs1047833 chr17:43342141 SPATA32 [+2662bp] C - 13 C vs. G 0.308 (G) 0.242 (G) <1 (-) 0 (-) >0.05
rs57344356 chr17:43306685 FMNL1 C - 13 A vs. G 0.042 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs12938138 chr17:43381472 RNA5SP443 [-23260bp] C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs7207549 chr17:43360128 SPATA32 [+20649bp] C - 13 A vs. G 0.317 (A) 0.108 (A) >1 (-) 0 (-) >0.05
chr17:43347210 chr17:43347210 SPATA32 [+7731bp] C - 3 A vs. G - - >1 (-) 16 (-) >0.05
rs1985556 chr17:43359241 SPATA32 [+19762bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs117306614 chr17:43290731 FMNL1 [-8080bp] C - 12 T vs. G 0.025 (T) 0.033 (T) <1 (-) 13 (-) >0.05
rs2072090 chr17:43351127 SPATA32 [+11648bp] C - 13 C vs. G 0.5 (C) 0.408 (G) <1 (-) 0 (-) >0.05
rs1133458 chr17:43315547 FMNL1 C - 13 A vs. G 0.092 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs111999393 chr17:43325185 FMNL1 [+498bp] C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs2074291 chr17:43361889 SPATA32 [+22410bp] C - 13 A vs. C 0.483 (A) 0.4 (C) <1 (-) 0 (-) >0.05
rs11079502 chr17:43350666 SPATA32 [+11187bp] C - 13 A vs. G 0.492 (A) 0.408 (A) >1 (-) 0 (-) >0.05
rs9972936 chr17:43353677 SPATA32 [+14198bp] C - 13 A vs. G 0.492 (A) 0.4 (G) <1 (-) 0 (-) >0.05
rs2074292 chr17:43361491 SPATA32 [+22012bp] C - 13 A vs. G 0.492 (A) 0.417 (G) <1 (-) 0 (-) >0.05
rs4792842 chr17:43360057 SPATA32 [+20578bp] C - 13 A vs. G 0.492 (A) 0.408 (G) <1 (-) 0 (-) >0.05
rs1989230 chr17:43312831 FMNL1 C - 13 A vs. G 0.067 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs7211069 chr17:43337171 SPATA32 C - 13 T vs. C 0.3 (T) 0.242 (T) >1 (-) 3 (-) >0.05
rs4792836 chr17:43336770 SPATA32 C - 13 T vs. C 0.3 (T) 0.233 (T) >1 (-) 3 (-) >0.05
rs4248914 chr17:43336480 SPATA32 C - 13 T vs. C 0.3 (C) 0.233 (C) <1 (-) 3 (-) >0.05
rs7212404 chr17:43317574 FMNL1 C - 13 A vs. G 0.092 (A) 0.117 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]