SPATA32, chr17:43331760-43339479 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
Meta_image?name=rs2867316

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34198001 chr17:43357938 SPATA32 [+18459bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs16939948 chr17:43358418 SPATA32 [+18939bp] C - 13 T vs. C 0.05 (C) - >1 (-) 0 (-) >0.05
rs7214657 chr17:43349920 SPATA32 [+10441bp] C - 13 T vs. G 0.3 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs57287955 chr17:43322513 FMNL1 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs57989921 chr17:43331177 SPATA32 [-583bp] C - 13 T vs. C 0.092 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs4792811 chr17:43347336 SPATA32 [+7857bp] C - 13 C vs. G 0.317 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs28544002 chr17:43325839 FMNL1 [+1152bp] C - 13 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs9908905 chr17:43309078 FMNL1 C - 13 A vs. G 0.175 (G) 0.233 (G) >1 (-) 0 (-) >0.05
rs147055305 chr17:43283972 FMNL1 [-14839bp] C - 5 T vs. G - - >1 (-) 0 (-) >0.05
rs4986168 chr17:43336574 SPATA32 C - 13 T vs. C 0.483 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs146443103 chr17:43286191 FMNL1 [-12620bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs4792809 chr17:43346980 SPATA32 [+7501bp] C - 13 T vs. G 0.3 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs8182370 chr17:43316613 FMNL1 C - 13 C vs. G 0.2 (C) 0.208 (C) <1 (-) 0 (-) >0.05
rs1801353 chr17:43319770 FMNL1 C - 13 T vs. C 0.417 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs8065345 chr17:43332015 SPATA32 C - 13 A vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs61352847 chr17:43329048 SPATA32 [-2712bp] C - 13 A vs. C 0.092 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs62066723 chr17:43327309 FMNL1 [+2622bp] C - 13 T vs. C 0.092 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs56269837 chr17:43335650 SPATA32 C - 13 A vs. G 0.483 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs4247365 chr17:43348887 SPATA32 [+9408bp] C - 13 A vs. G 0.3 (G) - <1 (-) 0 (-) >0.05
rs11656414 chr17:43337970 SPATA32 C - 13 A vs. G 0.483 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs9908076 chr17:43376110 RNA5SP443 [-28622bp] C - 13 T vs. C 0.05 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs708563 chr17:43340936 SPATA32 [+1457bp] C - 13 A vs. G 0.492 (G) 0.433 (G) <1 (-) 0 (-) >0.05
rs1989229 chr17:43312893 FMNL1 C - 13 A vs. G 0.175 (G) 0.208 (G) >1 (-) 0 (-) >0.05
rs62066724 chr17:43330066 SPATA32 [-1694bp] C - 13 A vs. G 0.092 (G) 0.025 (G) >1 (-) 0 (-) >0.05
rs57431070 chr17:43330929 SPATA32 [-831bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2285674 chr17:43342306 SPATA32 [+2827bp] C - 13 A vs. C 0.483 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs149183819 chr17:43295182 FMNL1 [-3629bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs11657021 chr17:43378701 RNA5SP443 [-26031bp] C - 7 T vs. C - - <1 (-) 33 (-) >0.05
rs17630064 chr17:43289122 FMNL1 [-9689bp] C - 13 A vs. G 0.042 (G) - >1 (-) 0 (-) >0.05
rs16939926 chr17:43343249 SPATA32 [+3770bp] C - 13 T vs. C 0.05 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs150333669 chr17:43307729 FMNL1 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs139098453 chr17:43294588 FMNL1 [-4223bp] C - 11 T vs. C - - <1 (-) 20 (-) >0.05
rs11574837 chr17:43341110 SPATA32 [+1631bp] C - 13 T vs. C 0.042 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs117225566 chr17:43283523 FMNL1 [-15288bp] C - 13 T vs. C 0.133 (C) - <1 (-) 0 (-) >0.05
rs3744410 chr17:43341913 SPATA32 [+2434bp] C - 13 T vs. G 0.05 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs117920061 chr17:43294811 FMNL1 [-4000bp] C - 13 A vs. G 0.017 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs4792892 chr17:43307719 FMNL1 C - 13 T vs. G 0.092 (T) 0.408 (T) <1 (-) 0 (-) >0.05
rs7225083 chr17:43337501 SPATA32 C - 13 C vs. G 0.358 (G) 0.292 (G) <1 (-) 14 (-) >0.05
rs4247364 chr17:43336687 SPATA32 C - 13 C vs. G 0.35 (G) 0.292 (G) <1 (-) 15 (-) >0.05
rs11869822 chr17:43306148 FMNL1 C - 13 A vs. T 0.2 (A) 0.483 (A) <1 (-) 0 (-) >0.05
rs7224548 chr17:43337136 SPATA32 C - 13 T vs. G 0.35 (G) 0.358 (G) <1 (-) 15 (-) >0.05
rs62066720 chr17:43305456 FMNL1 C - 13 C vs. G 0.2 (G) 0.492 (G) >1 (-) 0 (-) >0.05
rs60420573 chr17:43331438 SPATA32 [-322bp] C - 13 A vs. G 0.2 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs144274131 chr17:43300978 FMNL1 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs7213493 chr17:43349176 SPATA32 [+9697bp] C - 13 A vs. G 0.142 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs74253615 chr17:43290262 FMNL1 [-8549bp] C - 13 A vs. C 0.042 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs75104533 chr17:43289078 FMNL1 [-9733bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs111360850 chr17:43286163 FMNL1 [-12648bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs11079492 chr17:43306305 FMNL1 C - 13 C vs. G 0.2 (G) 0.492 (G) >1 (-) 0 (-) >0.05
rs7210761 chr17:43336997 SPATA32 C - 13 T vs. C 0.35 (T) 0.292 (T) >1 (-) 16 (-) >0.05

Association studies for this region [+]