SPATA32, chr17:43331760-43339479 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2867316 chr17:43376447 RNA5SP443 [-28285bp] All: C 108,990 15 T vs. C 0.275 (T) 0.317 (C) 0.90 (0.87-0.93) 0 (0-41) 8.29e-10
Meta_image?name=rs2867316

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11079493 chr17:43306345 FMNL1 C - 13 C vs. G 0.092 (C) 0.425 (C) <1 (-) 0 (-) >0.05
rs8068730 chr17:43294324 FMNL1 [-4487bp] C - 13 A vs. G 0.033 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs12940312 chr17:43316360 FMNL1 C - 13 A vs. G 0.117 (A) 0.083 (A) >1 (-) 42 (-) >0.05
rs139411248 chr17:43341902 SPATA32 [+2423bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs9893052 chr17:43306763 FMNL1 C - 13 T vs. C 0.2 (C) 0.5 (C) >1 (-) 0 (-) >0.05
rs147610568 chr17:43355096 SPATA32 [+15617bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs142966231 chr17:43376506 RNA5SP443 [-28226bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs9911183 chr17:43350514 SPATA32 [+11035bp] C - 13 A vs. G 0.142 (A) 0.108 (A) >1 (-) 0 (-) >0.05
rs111602534 chr17:43287317 FMNL1 [-11494bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs113847117 chr17:43287288 FMNL1 [-11523bp] C - 13 T vs. C 0.042 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs79592359 chr17:43286143 FMNL1 [-12668bp] C - 12 T vs. G 0.033 (G) 0.35 (G) >1 (-) 22 (-) >0.05
rs151210049 chr17:43301722 FMNL1 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs7215363 chr17:43300231 FMNL1 C - 13 C vs. G 0.042 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs112416568 chr17:43288550 FMNL1 [-10261bp] C - 10 T vs. G 0.092 (T) - <1 (-) 0 (-) >0.05
rs1047841 chr17:43340631 SPATA32 [+1152bp] C - 13 T vs. C 0.108 (T) - >1 (-) 0 (-) >0.05
rs17685379 chr17:43352049 SPATA32 [+12570bp] C - 13 T vs. C 0.142 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs58007130 chr17:43353269 SPATA32 [+13790bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs41280090 chr17:43324405 FMNL1 C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs117884330 chr17:43289312 FMNL1 [-9499bp] C - 13 C vs. G 0.058 (G) 0.333 (G) <1 (-) 24 (-) >0.05
rs7222751 chr17:43354930 SPATA32 [+15451bp] C - 13 A vs. G 0.142 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs12453698 chr17:43306649 FMNL1 C - 13 T vs. C 0.092 (T) 0.417 (T) >1 (-) 0 (-) >0.05
rs35084163 chr17:43339959 SPATA32 [+480bp] C - 12 C vs. G - - <1 (-) 4 (-) >0.05
rs16939943 chr17:43353763 SPATA32 [+14284bp] C - 13 T vs. C 0.142 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs72832882 chr17:43326243 FMNL1 [+1556bp] C - 7 T vs. G - - >1 (-) 10 (-) >0.05
rs9909488 chr17:43339759 SPATA32 [+280bp] C - 10 C vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs11574824 chr17:43361298 SPATA32 [+21819bp] C - 10 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs11574832 chr17:43346152 SPATA32 [+6673bp] C - 11 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs9916625 chr17:43327944 FMNL1 [+3257bp] C - 13 A vs. G 0.2 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs7209805 chr17:43327946 FMNL1 [+3259bp] C - 13 T vs. C 0.2 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs77023398 chr17:43294383 FMNL1 [-4428bp] C - 12 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs116991992 chr17:43343317 SPATA32 [+3838bp] C - 6 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs34584370 chr17:43339921 SPATA32 [+442bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs58744688 chr17:43308183 FMNL1 C - 13 A vs. C 0.2 (C) 0.5 (C) >1 (-) 0 (-) >0.05
rs7218169 chr17:43318778 FMNL1 C - 3 C vs. G 0.058 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs143814916 chr17:43311704 FMNL1 C - 11 A vs. C - - <1 (-) 14 (-) >0.05
rs141018344 chr17:43383506 RNA5SP443 [-21226bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs150787397 chr17:43370304 SPATA32 [+30825bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs144505970 chr17:43373455 RNA5SP443 [-31277bp] C - 10 C vs. G - - >1 (-) 0 (-) >0.05
rs3785803 chr17:43361213 SPATA32 [+21734bp] C - 13 A vs. G 0.133 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs35971701 chr17:43359891 SPATA32 [+20412bp] C - 13 T vs. C 0.2 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs3785804 chr17:43360994 SPATA32 [+21515bp] C - 13 A vs. G 0.142 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs34339831 chr17:43363372 SPATA32 [+23893bp] C - 10 C vs. G - - <1 (-) 0 (-) >0.05
rs11574831 chr17:43347610 SPATA32 [+8131bp] C - 13 T vs. C 0.142 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs58554752 chr17:43386709 RNA5SP443 [-18023bp] C - 10 A vs. C - - >1 (-) 0 (-) >0.05
rs79091156 chr17:43304649 FMNL1 C - 13 A vs. G 0.042 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs11574817 chr17:43365184 SPATA32 [+25705bp] C - 13 A vs. G 0.108 (A) - >1 (-) 0 (-) >0.05
rs9916564 chr17:43305131 FMNL1 C - 13 A vs. G 0.2 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs9889614 chr17:43305401 FMNL1 C - 13 A vs. G 0.2 (A) 0.492 (A) >1 (-) 0 (-) >0.05
rs36107645 chr17:43352642 SPATA32 [+13163bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs79789477 chr17:43380341 RNA5SP443 [-24391bp] C - 13 A vs. G 0.142 (A) 0.083 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]