TMEM79, chr1:156252726-156262976 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138107820 chr1:156299132 CCT3 All: C 96,250 12 C vs. T - - 0.59 (0.45-0.78) 0 (0-32) 1.55e-04
Meta_image?name=rs138107820

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2251847 chr1:156204047 PMF1-BGLAP C - 13 A vs. G 0.375 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs6684514 chr1:156255456 TMEM79 C - 12 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs2758607 chr1:156202759 PMF1-BGLAP C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs10908502 chr1:156300082 CCT3 C - 12 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs10908498 chr1:156278175 CCT3 [-584bp] C - 12 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs2842877 chr1:156226800 SMG5 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs1043165 chr1:156220056 SMG5 C - 13 T vs. C 0.467 (C) 0.492 (T) <1 (-) 23 (-) >0.05
rs2758612 chr1:156205301 PMF1-BGLAP C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4445457 chr1:156293492 CCT3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs144847100 chr1:156206718 PMF1-BGLAP C - 13 T vs. G - - <1 (-) 28 (-) >0.05
rs1804999 chr1:156219450 SMG5 C - 13 A vs. G 0.467 (G) 0.5 (G) <1 (-) 24 (-) >0.05
rs7542993 chr1:156224726 SMG5 C - 13 A vs. C - - <1 (-) 24 (-) >0.05
rs2764403 chr1:156303074 CCT3 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs2764402 chr1:156303527 CCT3 C - 13 T vs. C 0.333 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs2075165 chr1:156215899 PAQR6 C - 13 A vs. G 0.458 (A) 0.492 (G) >1 (-) 25 (-) >0.05
rs12755542 chr1:156281406 CCT3 C - 13 A vs. G 0.333 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs933489 chr1:156235120 SMG5 C - 13 T vs. C 0.475 (C) 0.492 (T) <1 (-) 22 (-) >0.05
rs2250265 chr1:156291365 CCT3 C - 13 T vs. C 0.333 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs7542798 chr1:156224304 SMG5 C - 13 T vs. C 0.467 (C) 0.492 (T) <1 (-) 30 (-) >0.05
rs2758614 chr1:156236674 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11264472 chr1:156292366 CCT3 C - 13 A vs. G 0.442 (G) - <1 (-) 18 (-) >0.05
rs2249790 chr1:156287360 CCT3 C - 13 T vs. C 0.333 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs2764404 chr1:156286423 CCT3 C - 13 T vs. C 0.333 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs2248273 chr1:156247907 SMG5 C - 13 T vs. C 0.325 (T) 0.258 (T) <1 (-) 0 (-) >0.05
rs759329 chr1:156230936 SMG5 C - 13 A vs. G 0.467 (G) 0.492 (A) <1 (-) 29 (-) >0.05
rs3001791 chr1:156251425 SMG5 C - 13 T vs. G 0.333 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs2842862 chr1:156275471 CCT3 [-3288bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2842880 chr1:156232358 SMG5 C - 13 T vs. C 0.333 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs10908492 chr1:156224795 SMG5 C - 13 T vs. C 0.467 (T) 0.492 (T) >1 (-) 31 (-) >0.05
rs2296374 chr1:156287403 CCT3 C - 13 T vs. C 0.467 (C) 0.467 (C) <1 (-) 20 (-) >0.05
rs2985709 chr1:156299578 CCT3 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2985710 chr1:156269869 VHLL [+441bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs7522860 chr1:156275281 CCT3 [-3478bp] C - 13 A vs. G 0.467 (A) 0.467 (A) >1 (-) 22 (-) >0.05
rs12072638 chr1:156267480 VHLL [-935bp] C - 13 T vs. G 0.433 (G) 0.408 (G) <1 (-) 21 (-) >0.05
rs139399073 chr1:156224686 SMG5 C - 7 A vs. G - - <1 (-) 21 (-) >0.05
rs12748659 chr1:156299998 CCT3 C - 8 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs35161831 chr1:156300731 CCT3 C - 8 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs12128955 chr1:156243821 SMG5 C - 13 T vs. C 0.475 (T) 0.417 (T) >1 (-) 20 (-) >0.05
rs9943105 chr1:156245245 SMG5 C - 13 T vs. C 0.475 (C) 0.458 (C) <1 (-) 20 (-) >0.05
rs7542045 chr1:156246473 SMG5 C - 13 C vs. G 0.467 (C) 0.475 (C) >1 (-) 20 (-) >0.05
rs6701440 chr1:156249505 SMG5 C - 13 A vs. G 0.467 (G) 0.475 (G) <1 (-) 23 (-) >0.05
rs2842863 chr1:156286396 CCT3 C - 13 A vs. G 0.242 (G) - >1 (-) 0 (-) >0.05
rs2736610 chr1:156204714 PMF1-BGLAP C - 13 T vs. C 0.042 (C) 0.1 (C) <1 (-) 16 (-) >0.05
rs78320178 chr1:156269113 VHLL C - 9 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs949464 chr1:156272271 VHLL [+2843bp] C - 13 T vs. C 0.467 (T) 0.458 (T) >1 (-) 22 (-) >0.05
rs11264460 chr1:156210422 PMF1-BGLAP C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs147948306 chr1:156297116 CCT3 C - 11 C vs. G - - <1 (-) 26 (-) >0.05
rs150735235 chr1:156274227 CCT3 [-4532bp] C - 5 A vs. C - - >1 (-) 0 (-) >0.05
rs2256704 chr1:156232131 SMG5 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs34377219 chr1:156235800 SMG5 C - 11 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]