Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
USA (IPDGC-NIA) C UKPDSBB CL 937 (40%) 1896 (53%) 58 (13) - - - 63 (10) - 9,622

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13033661 chr2:169154841 intergenic G vs. A All: C 15 108,990 - - 0.81 (0.76-0.86) 35 (0-65) 3.99e-12
rs55752940 chr2:169154905 intergenic G vs. A All: C 15 108,990 - 0.375 (A) 0.93 (0.90-0.96) 0 (0-3) 1.49e-06
rs13016703 chr2:169155595 intergenic G vs. T All: C 15 108,990 0.108 (G) 0.308 (G) 1.20 (1.15-1.26) 0 (0-53) 1.35e-14
rs2063963 chr2:169155936 intergenic G vs. A All: C 15 108,990 0.408 (G) 0.142 (G) 0.93 (0.90-0.96) 0 (0-14) 5.48e-06
rs4667572 chr2:169156000 intergenic A vs. G All: C 15 108,990 0.142 (A) 0.308 (A) 1.14 (1.09-1.20) 0 (0-53) 3.00e-09
rs7595706 chr2:169156921 intergenic A vs. G All: C 15 108,990 0.4 (A) 0.142 (A) 0.93 (0.90-0.96) 0 (0-23) 4.44e-06
rs2677273 chr2:169157332 intergenic T vs. A All: C 15 108,990 0.458 (T) 0.458 (A) 1.00 (0.97-1.03) 0 (0-43) 0.886
rs2466561 chr2:169157973 intergenic G vs. A All: C 15 108,990 0.4 (G) 0.142 (G) 0.93 (0.90-0.96) 0 (0-8) 7.82e-06
rs1517337 chr2:169157997 intergenic T vs. G All: C 14 102,085 0.45 (T) 0.45 (G) 1.00 (0.97-1.04) 0 (0-45) 0.873
rs1517340 chr2:169158403 intergenic G vs. A All: C 15 108,990 0.458 (G) 0.45 (A) 1.00 (0.97-1.03) 0 (0-40) 0.987
rs2944785 chr2:169159691 intergenic C vs. G All: C 15 108,990 0.442 (C) 0.467 (G) 1.00 (0.97-1.04) 0 (0-46) 0.832
rs7564800 chr2:169161223 intergenic C vs. T All: C 15 108,990 0.425 (C) 0.117 (C) 0.93 (0.90-0.96) 0 (0-14) 6.99e-06
rs4668059 chr2:169166282 intergenic C vs. T All: C 15 108,990 0.117 (C) 0.208 (C) 1.17 (1.11-1.22) 0 (0-53) 1.86e-10
rs72886249 chr2:169186698 intergenic G vs. A All: C 14 105,041 0.058 (G) - 1.12 (1.03-1.23) 19 (0-57) 0.011
rs11627828 chr2:172502676 DYNC1I2 [-41243bp] C vs. T All: C 15 108,990 - - 1.11 (1.06-1.16) 36 (0-66) 3.08e-06
rs11627767 chr2:172502761 DYNC1I2 [-41158bp] A vs. G All: C 15 108,990 - - 1.11 (1.07-1.16) 33 (0-64) 1.54e-06
rs62178292 chr2:200666527 FTCDNL1 A vs. G All: C 15 108,990 0.142 (A) - 1.11 (1.05-1.17) 0 (-) 7.29e-05
rs62178295 chr2:200674835 FTCDNL1 A vs. G All: C 15 108,990 0.158 (A) - 1.11 (1.06-1.17) 0 (0-10) 1.77e-05
rs62178318 chr2:200699827 FTCDNL1 A vs. G All: C 15 108,990 0.125 (A) - 1.12 (1.06-1.18) 0 (0-0) 4.15e-05
rs17445200 chr2:200699952 FTCDNL1 G vs. A All: C 15 108,990 0.125 (G) - 1.12 (1.06-1.17) 0 (-) 2.63e-05
rs72924476 chr2:200700250 FTCDNL1 C vs. T All: C 15 108,990 0.142 (C) - 1.12 (1.06-1.17) 0 (-) 2.92e-05
rs41423249 chr2:202867522 FZD7 [-31788bp] C vs. T All: C 15 108,990 0.317 (C) 0.258 (C) 1.08 (1.04-1.11) 18 (0-55) 7.06e-05
rs6710983 chr2:202873552 FZD7 [-25758bp] G vs. A All: C 15 108,990 - - 0.93 (0.90-0.97) 21 (0-57) 1.68e-04
rs12466923 chr2:208013555 KLF7 C vs. A All: C 15 108,990 0.167 (C) 0.242 (C) 1.08 (1.04-1.13) 0 (0-46) 4.69e-05
rs13006623 chr2:208019611 KLF7 A vs. G All: C 15 108,990 0.158 (A) 0.058 (A) 1.08 (1.03-1.12) 0 (0-47) 5.88e-04
rs13033370 chr2:218815695 TNS1 C vs. T All: C 14 105,041 0.017 (C) - 1.29 (1.14-1.46) 0 (0-44) 7.67e-05
rs10177639 chr2:218816702 TNS1 T vs. C All: C 15 108,990 0.033 (T) - 1.21 (1.11-1.31) 0 (0-47) 2.02e-05
rs7368811 chr2:236904269 AGAP1 C vs. T All: C 15 108,990 0.35 (C) 0.492 (T) 0.94 (0.91-0.97) 12 (0-50) 2.37e-04
rs13013244 chr2:236906027 AGAP1 A vs. G All: C 15 108,990 0.383 (A) 0.483 (G) 0.94 (0.90-0.97) 14 (0-52) 9.53e-05
rs10211043 chr2:236909416 AGAP1 A vs. G All: C 15 108,990 0.375 (A) 0.242 (A) 0.92 (0.89-0.95) 14 (0-52) 4.60e-06
rs35116044 chr2:236912227 AGAP1 C vs. T All: C 15 108,990 0.492 (C) 0.333 (T) 0.94 (0.91-0.97) 10 (0-48) 6.64e-05
rs13025044 chr2:236916549 AGAP1 G vs. A All: C 15 108,990 0.358 (G) 0.483 (G) 0.92 (0.89-0.95) 7 (0-57) 3.88e-07
rs11890052 chr2:236918533 AGAP1 A vs. G All: C 15 108,990 0.358 (A) 0.467 (A) 0.92 (0.89-0.95) 8 (0-44) 3.49e-07
rs3738994 chr2:236918539 AGAP1 T vs. C All: C 15 108,990 0.358 (T) 0.467 (T) 0.92 (0.89-0.95) 7 (0-44) 3.56e-07
rs3738993 chr2:236918671 AGAP1 C vs. T All: C 15 108,990 0.358 (C) 0.483 (C) 0.92 (0.89-0.95) 10 (0-48) 3.64e-07
rs6431418 chr2:236919559 AGAP1 C vs. T All: C 15 108,990 0.358 (C) 0.492 (C) 0.92 (0.89-0.95) 7 (0-57) 3.06e-07
rs6431419 chr2:236919669 AGAP1 C vs. A All: C 15 108,990 0.358 (C) 0.492 (C) 0.92 (0.89-0.95) 7 (0-57) 3.03e-07
rs6749436 chr2:236919992 AGAP1 T vs. C All: C 15 108,990 0.358 (T) 0.483 (T) 0.92 (0.89-0.95) 6 (0-57) 3.03e-07
rs12053257 chr2:236920174 AGAP1 C vs. T All: C 15 108,990 0.358 (C) 0.483 (C) 0.92 (0.89-0.95) 6 (0-57) 2.85e-07
rs34769167 chr2:236920442 AGAP1 A vs. G All: C 15 108,990 0.358 (A) 0.483 (A) 0.92 (0.89-0.95) 6 (0-56) 2.85e-07
rs2123513 chr2:236920638 AGAP1 T vs. C All: C 15 108,990 0.358 (T) 0.483 (T) 0.92 (0.89-0.95) 6 (0-56) 2.80e-07
rs7598567 chr2:236920673 AGAP1 A vs. G All: C 15 108,990 0.358 (A) 0.483 (A) 0.92 (0.89-0.95) 6 (0-57) 2.60e-07
rs7557693 chr2:236920713 AGAP1 G vs. A All: C 15 108,990 0.358 (G) 0.483 (G) 0.92 (0.89-0.95) 6 (0-56) 2.44e-07
rs2123512 chr2:236920731 AGAP1 C vs. T All: C 15 108,990 0.358 (C) 0.483 (C) 0.92 (0.89-0.95) 6 (0-56) 2.42e-07
rs2317302 chr2:236921608 AGAP1 C vs. T All: C 15 108,990 - - 1.09 (1.05-1.12) 1 (0-54) 2.67e-07
rs2317303 chr2:236921702 AGAP1 A vs. G All: C 15 108,990 0.358 (A) 0.483 (A) 0.92 (0.89-0.95) 1 (0-54) 2.74e-07
rs2317305 chr2:236922151 AGAP1 G vs. A All: C 15 108,990 0.358 (G) 0.483 (G) 0.92 (0.89-0.95) 1 (0-54) 2.64e-07
rs10206890 chr2:236922324 AGAP1 A vs. C All: C 15 108,990 0.5 (A) 0.342 (A) 1.07 (1.04-1.11) 4 (0-56) 1.42e-05
rs6761121 chr2:236922541 AGAP1 T vs. C All: C 15 108,990 0.358 (T) 0.483 (T) 0.92 (0.89-0.95) 1 (0-54) 2.62e-07
rs7420415 chr2:236922737 AGAP1 A vs. G All: C 15 108,990 0.492 (A) 0.342 (A) 1.07 (1.04-1.11) 4 (0-56) 1.20e-05