CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3130988 chr6:31085700 PSORS1C1 C - 12 T vs. C 0.3 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs3095317 chr6:31088671 PSORS1C1 C - 12 A vs. G 0.433 (G) - >1 (-) 0 (-) >0.05
rs9468878 chr6:31143155 POU5F1 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs2535293 chr6:31062363 RNU6-1133P [+11477bp] C - 12 A vs. G 0.458 (A) 0.442 (G) >1 (-) 0 (-) >0.05
rs2517427 chr6:31064739 RNU6-1133P [+13853bp] C - 12 A vs. C 0.458 (A) 0.442 (C) >1 (-) 0 (-) >0.05
rs9263911 chr6:31175667 HCG27 [+3922bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs55640410 chr6:31094101 PSORS1C1 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs67565791 chr6:31061013 RNU6-1133P [+10127bp] C - 12 T vs. C 0.1 (T) 0.017 (T) <1 (-) 0 (-) >0.05
rs9263570 chr6:31069672 C6orf15 [-9328bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs150561730 chr6:31175262 HCG27 [+3517bp] C - 12 A vs. G - - >1 (-) 14 (-) >0.05
rs9263571 chr6:31069697 C6orf15 [-9303bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs73401031 chr6:31134482 TCF19 C - 12 A vs. C 0.025 (A) - >1 (-) 0 (-) >0.05
rs76269054 chr6:31152881 POU5F1 [+4373bp] C - 6 A vs. C - - <1 (-) 0 (-) >0.05
rs6922051 chr6:31154820 POU5F1 [+6312bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs3094216 chr6:31084048 PSORS1C1 C - 12 A vs. G 0.292 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs3132550 chr6:31086048 PSORS1C1 C - 12 A vs. G 0.292 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs3132542 chr6:31091163 PSORS1C1 C - 12 A vs. G 0.275 (A) 0.367 (G) <1 (-) 9 (-) >0.05
rs151157774 chr6:31119121 CCHCR1 C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs9263629 chr6:31075798 C6orf15 [-3202bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs3094202 chr6:31092547 PSORS1C1 C - 12 A vs. G - - >1 (-) 26 (-) >0.05
rs146494367 chr6:31063284 RNU6-1133P [+12398bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs148241446 chr6:31109909 CCHCR1 [-307bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs3094206 chr6:31091642 PSORS1C1 C - 12 C vs. G 0.292 (G) 0.367 (C) >1 (-) 9 (-) >0.05
rs3130998 chr6:31090945 PSORS1C1 C - 12 T vs. C 0.292 (T) 0.342 (C) <1 (-) 10 (-) >0.05
rs2517414 chr6:31065627 C6orf15 [-13373bp] C - 12 T vs. C 0.467 (T) 0.442 (C) >1 (-) 0 (-) >0.05
rs2517423 chr6:31064827 RNU6-1133P [+13941bp] C - 12 T vs. C 0.458 (C) 0.442 (T) <1 (-) 0 (-) >0.05
rs2517440 chr6:31064083 RNU6-1133P [+13197bp] C - 12 T vs. C 0.458 (T) 0.442 (C) >1 (-) 0 (-) >0.05
rs3095310 chr6:31091447 PSORS1C1 C - 12 T vs. C 0.292 (T) 0.367 (C) <1 (-) 11 (-) >0.05
rs3130976 chr6:31081940 PSORS1C1 [-587bp] C - 12 T vs. C 0.292 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs9263582 chr6:31070664 C6orf15 [-8336bp] C - 12 A vs. G 0.142 (A) - <1 (-) 46 (-) >0.05
rs3131000 chr6:31091273 PSORS1C1 C - 12 C vs. G 0.292 (C) 0.367 (G) <1 (-) 10 (-) >0.05
rs2517410 chr6:31066183 C6orf15 [-12817bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs1265085 chr6:31110671 CCHCR1 C - 12 C vs. G 0.192 (C) 0.292 (C) <1 (-) 0 (-) >0.05
rs2429721 chr6:31065562 C6orf15 [-13438bp] C - 12 A vs. G 0.458 (A) 0.442 (G) >1 (-) 0 (-) >0.05
rs3130970 chr6:31065407 C6orf15 [-13593bp] C - 12 T vs. C 0.475 (T) 0.442 (C) >1 (-) 0 (-) >0.05
rs3095305 chr6:31065308 C6orf15 [-13692bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9263569 chr6:31069644 C6orf15 [-9356bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs9468882 chr6:31151039 POU5F1 [+2531bp] C - 12 A vs. T 0.25 (A) - <1 (-) 0 (-) >0.05
rs2535295 chr6:31061848 RNU6-1133P [+10962bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2517443 chr6:31064022 RNU6-1133P [+13136bp] C - 12 T vs. C 0.458 (T) 0.442 (C) >1 (-) 0 (-) >0.05
rs3095312 chr6:31090837 PSORS1C1 C - 12 C vs. G 0.283 (C) 0.358 (G) <1 (-) 9 (-) >0.05
rs3130545 chr6:31063328 RNU6-1133P [+12442bp] C - 12 T vs. C 0.333 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs3130997 chr6:31090858 PSORS1C1 C - 12 A vs. G 0.292 (A) 0.367 (G) <1 (-) 10 (-) >0.05
rs3094196 chr6:31093947 PSORS1C1 C - 12 A vs. G 0.2 (G) 0.325 (G) >1 (-) 18 (-) >0.05
rs1265058 chr6:31078557 C6orf15 [-443bp] C - 12 A vs. G 0.475 (G) 0.442 (A) <1 (-) 0 (-) >0.05
rs1265059 chr6:31078495 C6orf15 [-505bp] C - 12 C vs. G 0.467 (C) 0.433 (G) >1 (-) 0 (-) >0.05
rs1265056 chr6:31078650 C6orf15 [-350bp] C - 12 A vs. G 0.458 (G) 0.442 (A) <1 (-) 0 (-) >0.05
rs117891042 chr6:31061782 RNU6-1133P [+10896bp] C - 8 A vs. G - 0.142 (G) >1 (-) 0 (-) >0.05
rs1265074 chr6:31113214 CCHCR1 C - 12 A vs. C 0.192 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs2233972 chr6:31080103 C6orf15 C - 12 T vs. C 0.042 (C) 0.142 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]