CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3130966 chr6:31060600 RNU6-1133P [+9714bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9394038 chr6:31070548 C6orf15 [-8452bp] C - 12 T vs. C - 0.183 (T) >1 (-) 0 (-) >0.05
rs142242725 chr6:31135878 POU5F1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9501072 chr6:31164495 HCG27 [-1042bp] C - 12 A vs. G - - >1 (-) 25 (-) >0.05
rs2233947 chr6:31107055 PSORS1C1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs75118992 chr6:31108727 PSORS1C1 [+858bp] C - 4 A vs. G - 0.033 (A) >1 (-) 0 (-) >0.05
rs9501071 chr6:31164471 HCG27 [-1066bp] C - 12 C vs. G - - <1 (-) 25 (-) >0.05
rs141715528 chr6:31136208 POU5F1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs151095308 chr6:31134323 TCF19 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2073724 chr6:31129707 TCF19 C - 12 T vs. C 0.067 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs72856737 chr6:31134625 TCF19 C - 12 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs17190798 chr6:31131276 TCF19 C - 12 A vs. T 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs17190811 chr6:31131837 TCF19 C - 12 A vs. T 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs17190783 chr6:31131209 TCF19 C - 12 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs45438402 chr6:31133663 TCF19 C - 12 T vs. C 0.067 (C) - >1 (-) 0 (-) >0.05
rs72856736 chr6:31133870 TCF19 C - 12 A vs. G 0.067 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs3131004 chr6:31095294 PSORS1C1 C - 12 A vs. G 0.4 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs3131006 chr6:31098134 PSORS1C1 C - 12 A vs. T 0.283 (T) - >1 (-) 0 (-) >0.05
rs3132559 chr6:31105265 PSORS1C1 C - 12 A vs. G 0.45 (G) 0.35 (A) >1 (-) 0 (-) >0.05
rs78517503 chr6:31164906 HCG27 [-631bp] C - 12 A vs. G 0.025 (A) - >1 (-) 25 (-) >0.05
rs9501074 chr6:31164968 HCG27 [-569bp] C - 12 A vs. C 0.075 (A) 0.033 (A) >1 (-) 25 (-) >0.05
rs17197276 chr6:31146340 POU5F1 C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9500884 chr6:31165733 HCG27 C - 12 T vs. C - - >1 (-) 25 (-) >0.05
rs114881571 chr6:31128605 TCF19 C - 12 T vs. C 0.067 (T) - <1 (-) 0 (-) >0.05
rs17851818 chr6:31132956 TCF19 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs1268928 chr6:31078899 C6orf15 [-101bp] C - 12 T vs. G 0.333 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs72856758 chr6:31141954 POU5F1 C - 12 T vs. C 0.067 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs2233986 chr6:31079076 C6orf15 C - 12 A vs. G 0.325 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs2233987 chr6:31079074 C6orf15 C - 12 T vs. C 0.325 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs72856757 chr6:31141671 POU5F1 C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs887464 chr6:31145920 POU5F1 C - 12 T vs. C 0.433 (T) 0.4 (T) <1 (-) 32 (-) >0.05
rs140765682 chr6:31160394 HCG27 [-5143bp] C - 10 T vs. G - - >1 (-) 0 (-) >0.05
rs130072 chr6:31112484 CCHCR1 C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs1265100 chr6:31105310 PSORS1C1 C - 12 A vs. G 0.15 (G) 0.325 (G) >1 (-) 44 (-) >0.05
rs138598988 chr6:31115032 CCHCR1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs111748703 chr6:31149228 POU5F1 [+720bp] C - 12 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs142031128 chr6:31164689 HCG27 [-848bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs4947297 chr6:31073537 C6orf15 [-5463bp] C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs72863043 chr6:31119445 CCHCR1 C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs111837807 chr6:31121232 CCHCR1 C - 12 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs3130564 chr6:31101674 PSORS1C1 C - 12 T vs. C 0.283 (T) - <1 (-) 0 (-) >0.05
rs2517473 chr6:31077239 C6orf15 [-1761bp] C - 12 T vs. C 0.075 (T) 0.183 (T) >1 (-) 12 (-) >0.05
rs72856706 chr6:31120729 CCHCR1 C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9404978 chr6:31075718 C6orf15 [-3282bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs11540822 chr6:31118898 CCHCR1 C - 12 A vs. T 0.067 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs113379855 chr6:31153548 POU5F1 [+5040bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2233963 chr6:31080926 C6orf15 [+590bp] C - 12 A vs. G 0.042 (A) 0.108 (A) >1 (-) 0 (-) >0.05
rs72856720 chr6:31125402 CCHCR1 C - 11 C vs. G 0.05 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs72856721 chr6:31127800 TCF19 C - 12 T vs. G 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263910 chr6:31175662 HCG27 [+3917bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]