CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9263688 chr6:31091967 PSORS1C1 C - 12 A vs. G 0.033 (G) 0.033 (G) <1 (-) 13 (-) >0.05
rs149396823 chr6:31065117 C6orf15 [-13883bp] C - 10 A vs. G - - >1 (-) 12 (-) >0.05
rs9263881 chr6:31171924 HCG27 [+179bp] C - 12 A vs. G 0.2 (G) 0.042 (G) <1 (-) 41 (-) >0.05
rs13196399 chr6:31068445 C6orf15 [-10555bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9263707 chr6:31095246 PSORS1C1 C - 12 T vs. C - 0.033 (T) >1 (-) 12 (-) >0.05
rs2233979 chr6:31079695 C6orf15 C - 5 C vs. G - - >1 (-) 0 (-) >0.05
rs3887382 chr6:31172332 HCG27 [+587bp] C - 12 A vs. C - - >1 (-) 41 (-) >0.05
rs9263687 chr6:31091834 PSORS1C1 C - 12 A vs. G 0.017 (A) 0.05 (A) >1 (-) 13 (-) >0.05
rs9263794 chr6:31130019 TCF19 C - 12 A vs. G 0.175 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs9263886 chr6:31172879 HCG27 [+1134bp] C - 12 A vs. T 0.2 (T) 0.042 (T) <1 (-) 41 (-) >0.05
rs12660585 chr6:31173768 HCG27 [+2023bp] C - 12 A vs. G 0.2 (G) 0.042 (G) <1 (-) 41 (-) >0.05
rs72853194 chr6:31078167 C6orf15 [-833bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs9263809 chr6:31136577 POU5F1 C - 12 A vs. G 0.175 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs117265349 chr6:31138692 POU5F1 C - 11 A vs. G - 0.067 (A) >1 (-) 0 (-) >0.05
rs146861748 chr6:31156232 POU5F1 [+7724bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs9263697 chr6:31093581 PSORS1C1 C - 12 T vs. C 0.033 (T) 0.033 (T) >1 (-) 13 (-) >0.05
rs9263702 chr6:31094195 PSORS1C1 C - 12 T vs. C 0.033 (T) 0.033 (T) >1 (-) 13 (-) >0.05
rs9263811 chr6:31137745 POU5F1 C - 12 T vs. C 0.175 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs9263810 chr6:31137632 POU5F1 C - 12 C vs. G 0.175 (C) - <1 (-) 0 (-) >0.05
rs9263768 chr6:31119049 CCHCR1 C - 12 T vs. C 0.183 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263849 chr6:31156131 POU5F1 [+7623bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs9263816 chr6:31138797 POU5F1 C - 12 T vs. G 0.175 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs3998428 chr6:31116946 CCHCR1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs11489180 chr6:31174111 HCG27 [+2366bp] C - 12 T vs. C - - >1 (-) 41 (-) >0.05
rs9263800 chr6:31134599 TCF19 C - 12 A vs. G 0.175 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs2394885 chr6:31174590 HCG27 [+2845bp] C - 12 C vs. G 0.192 (C) 0.042 (C) >1 (-) 41 (-) >0.05
rs9263802 chr6:31135136 POU5F1 C - 12 T vs. C 0.175 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs28744239 chr6:31174758 HCG27 [+3013bp] C - 12 C vs. G - - >1 (-) 41 (-) >0.05
rs2233982 chr6:31079440 C6orf15 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs1044870 chr6:31130821 TCF19 C - 12 T vs. C 0.175 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs73388867 chr6:31062815 RNU6-1133P [+11929bp] C - 12 A vs. C 0.025 (A) - <1 (-) 0 (-) >0.05
rs9263796 chr6:31132883 TCF19 C - 12 T vs. C 0.175 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263792 chr6:31128673 TCF19 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9263790 chr6:31128411 TCF19 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs28744240 chr6:31175190 HCG27 [+3445bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9501079 chr6:31175097 HCG27 [+3352bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs144885162 chr6:31122564 CCHCR1 C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs76003751 chr6:31146276 POU5F1 C - 11 A vs. G 0.025 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs138132016 chr6:31163888 HCG27 [-1649bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs9263719 chr6:31096575 PSORS1C1 C - 12 T vs. C 0.067 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs2269713 chr6:31141127 POU5F1 C - 12 A vs. G 0.033 (G) 0.208 (G) <1 (-) 51 (-) >0.05
rs7757012 chr6:31108562 PSORS1C1 [+693bp] C - 12 T vs. C 0.175 (C) 0.092 (C) >1 (-) 7 (-) >0.05
rs9263766 chr6:31117015 CCHCR1 C - 12 A vs. G 0.175 (A) - <1 (-) 0 (-) >0.05
rs9263775 chr6:31120901 CCHCR1 C - 12 T vs. C 0.183 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263769 chr6:31119716 CCHCR1 C - 12 T vs. G 0.175 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9263786 chr6:31126230 TCF19 [-89bp] C - 12 T vs. C 0.175 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs149656636 chr6:31121517 CCHCR1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs9263785 chr6:31125823 CCHCR1 C - 12 T vs. G 0.175 (G) - >1 (-) 0 (-) >0.05
rs12204500 chr6:31076397 C6orf15 [-2603bp] C - 12 A vs. T 0.067 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs9263776 chr6:31121026 CCHCR1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]