CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs16898922 chr6:31171224 HCG27 C - 12 T vs. G 0.025 (T) 0.008 (T) >1 (-) 0 (-) >0.05
rs9263738 chr6:31109767 CCHCR1 [-449bp] C - 12 T vs. C 0.175 (C) 0.1 (C) >1 (-) 6 (-) >0.05
rs9263777 chr6:31121489 CCHCR1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9263783 chr6:31123569 CCHCR1 C - 12 T vs. C 0.175 (T) - <1 (-) 0 (-) >0.05
rs9263782 chr6:31123554 CCHCR1 C - 12 A vs. G 0.175 (A) - <1 (-) 0 (-) >0.05
rs12215963 chr6:31138619 POU5F1 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9263817 chr6:31138917 POU5F1 C - 12 A vs. G 0.175 (A) - <1 (-) 0 (-) >0.05
rs9263737 chr6:31109545 CCHCR1 [-671bp] C - 12 C vs. G 0.208 (C) 0.167 (C) <1 (-) 18 (-) >0.05
rs9263774 chr6:31120841 CCHCR1 C - 12 C vs. G 0.167 (C) - <1 (-) 0 (-) >0.05
rs9263781 chr6:31123416 CCHCR1 C - 12 T vs. C 0.175 (C) - >1 (-) 0 (-) >0.05
rs9501064 chr6:31140445 POU5F1 C - 12 T vs. C 0.058 (T) 0.225 (T) >1 (-) 22 (-) >0.05
rs9501065 chr6:31140615 POU5F1 C - 12 T vs. C 0.058 (T) 0.217 (T) >1 (-) 22 (-) >0.05
rs130077 chr6:31122330 CCHCR1 C - 12 A vs. G 0.175 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs9394040 chr6:31147892 POU5F1 C - 12 T vs. C 0.308 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs6929945 chr6:31173660 HCG27 [+1915bp] C - 12 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs147099024 chr6:31173332 HCG27 [+1587bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs147046705 chr6:31064175 RNU6-1133P [+13289bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs9263749 chr6:31114515 CCHCR1 C - 12 A vs. G 0.175 (A) 0.1 (A) <1 (-) 5 (-) >0.05
rs116446063 chr6:31173436 HCG27 [+1691bp] C - 12 A vs. G 0.025 (G) - <1 (-) 0 (-) >0.05
rs142788130 chr6:31145129 POU5F1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9263714 chr6:31095605 PSORS1C1 C - 12 T vs. C 0.117 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs9263818 chr6:31139040 POU5F1 C - 12 A vs. C 0.175 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs115103823 chr6:31148296 POU5F1 C - 12 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs9263739 chr6:31111356 CCHCR1 C - 12 T vs. C 0.175 (T) 0.1 (T) <1 (-) 7 (-) >0.05
rs116656026 chr6:31147856 POU5F1 C - 12 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs9263740 chr6:31111400 CCHCR1 C - 12 T vs. C 0.208 (C) 0.283 (C) >1 (-) 24 (-) >0.05
rs9263734 chr6:31109157 CCHCR1 [-1059bp] C - 12 A vs. G - - <1 (-) 24 (-) >0.05
rs145162876 chr6:31104053 PSORS1C1 C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs17190762 chr6:31126992 TCF19 C - 11 A vs. G 0.008 (A) - >1 (-) 4 (-) >0.05
rs9263733 chr6:31108829 PSORS1C1 [+960bp] C - 12 T vs. C - 0.033 (T) <1 (-) 0 (-) >0.05
rs138879445 chr6:31094088 PSORS1C1 C - 9 A vs. G - - <1 (-) 15 (-) >0.05
rs114047342 chr6:31143451 POU5F1 C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs9295956 chr6:31144912 POU5F1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs9263741 chr6:31112213 CCHCR1 C - 12 A vs. C - - >1 (-) 7 (-) >0.05
rs145044939 chr6:31131788 TCF19 C - 8 A vs. T - - >1 (-) 0 (-) >0.05
rs142447162 chr6:31156863 POU5F1 [+8355bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9263748 chr6:31114448 CCHCR1 C - 12 T vs. C 0.175 (T) 0.1 (T) <1 (-) 6 (-) >0.05
rs9357111 chr6:31147916 POU5F1 C - 12 T vs. C 0.308 (T) 0.492 (C) >1 (-) 1 (-) >0.05
rs9263756 chr6:31115655 CCHCR1 C - 12 T vs. C - - <1 (-) 5 (-) >0.05
rs17196961 chr6:31094803 PSORS1C1 C - 12 T vs. G 0.067 (T) 0.208 (T) <1 (-) 0 (-) >0.05
rs9263751 chr6:31114724 CCHCR1 C - 12 A vs. C 0.175 (C) 0.1 (C) >1 (-) 5 (-) >0.05
rs6903261 chr6:31115307 CCHCR1 C - 12 A vs. G 0.175 (G) 0.1 (G) >1 (-) 5 (-) >0.05
rs139277467 chr6:31174608 HCG27 [+2863bp] C - 12 A vs. C - - <1 (-) 0 (-) >0.05
rs12214039 chr6:31060362 RNU6-1133P [+9476bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs3734852 chr6:31078804 C6orf15 [-196bp] C - 12 A vs. G 0.067 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs116772142 chr6:31096862 PSORS1C1 C - 11 A vs. G 0.008 (A) - >1 (-) 13 (-) >0.05
rs150632192 chr6:31164263 HCG27 [-1274bp] C - 12 A vs. G - - <1 (-) 5 (-) >0.05
rs4947305 chr6:31144429 POU5F1 C - 12 A vs. G 0.308 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs130070 chr6:31116220 CCHCR1 C - 12 A vs. G 0.167 (A) - <1 (-) 0 (-) >0.05
rs9263778 chr6:31123157 CCHCR1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]