CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6922382 chr6:31164220 HCG27 [-1317bp] C - 12 A vs. G - - <1 (-) 5 (-) >0.05
rs6931921 chr6:31095003 PSORS1C1 C - 12 C vs. G 0.067 (C) 0.208 (C) <1 (-) 0 (-) >0.05
rs6921801 chr6:31163853 HCG27 [-1684bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs144232425 chr6:31151118 POU5F1 [+2610bp] C - 12 T vs. C - - <1 (-) 2 (-) >0.05
rs45506394 chr6:31133677 TCF19 C - 11 A vs. G 0.033 (A) - >1 (-) 12 (-) >0.05
rs6904246 chr6:31168200 HCG27 C - 12 A vs. G 0.017 (A) - >1 (-) 1 (-) >0.05
rs115928361 chr6:31102423 PSORS1C1 C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs71563311 chr6:31136994 POU5F1 C - 12 A vs. C 0.008 (A) - <1 (-) 0 (-) >0.05
rs146323972 chr6:31146910 POU5F1 C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs2233940 chr6:31107922 PSORS1C1 [+53bp] C - 12 T vs. C 0.008 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs1265091 chr6:31108129 PSORS1C1 [+260bp] C - 12 T vs. C - - <1 (-) 5 (-) >0.05
rs28749547 chr6:31150350 POU5F1 [+1842bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9263499 chr6:31064710 RNU6-1133P [+13824bp] C - 12 T vs. C 0.217 (C) 0.183 (C) >1 (-) 13 (-) >0.05
rs143543919 chr6:31165507 HCG27 [-30bp] C - 12 T vs. G - - >1 (-) 1 (-) >0.05
rs114907333 chr6:31142097 POU5F1 C - 12 T vs. C - 0.017 (C) <1 (-) 0 (-) >0.05
rs114401652 chr6:31149743 POU5F1 [+1235bp] C - 12 A vs. G 0.025 (G) 0.008 (G) <1 (-) 0 (-) >0.05
rs115919686 chr6:31142956 POU5F1 C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs6937752 chr6:31148606 POU5F1 [+98bp] C - 12 T vs. C 0.308 (T) 0.483 (C) >1 (-) 0 (-) >0.05
rs9263612 chr6:31072723 C6orf15 [-6277bp] C - 12 A vs. T - 0.117 (A) <1 (-) 0 (-) >0.05
rs3871246 chr6:31145431 POU5F1 C - 12 T vs. C 0.308 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs114216136 chr6:31142293 POU5F1 C - 12 T vs. C 0.017 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs3823416 chr6:31100776 PSORS1C1 C - 12 T vs. C 0.042 (T) 0.183 (T) >1 (-) 25 (-) >0.05
rs9263603 chr6:31071784 C6orf15 [-7216bp] C - 7 T vs. C 0.325 (T) 0.083 (T) >1 (-) 21 (-) >0.05
rs115331068 chr6:31149746 POU5F1 [+1238bp] C - 12 A vs. G 0.025 (G) 0.008 (G) <1 (-) 0 (-) >0.05
rs9263604 chr6:31071785 C6orf15 [-7215bp] C - 7 T vs. C 0.325 (T) 0.083 (T) >1 (-) 21 (-) >0.05
rs115391134 chr6:31119497 CCHCR1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9263663 chr6:31086617 PSORS1C1 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs2894179 chr6:31066671 C6orf15 [-12329bp] C - 12 A vs. C 0.192 (A) 0.183 (A) <1 (-) 14 (-) >0.05
rs9263512 chr6:31066677 C6orf15 [-12323bp] C - 12 T vs. G 0.192 (T) 0.183 (T) <1 (-) 14 (-) >0.05
rs17191082 chr6:31154507 POU5F1 [+5999bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2233975 chr6:31080009 C6orf15 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs13196158 chr6:31098301 PSORS1C1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs41257954 chr6:31138310 POU5F1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7756290 chr6:31070316 C6orf15 [-8684bp] C - 12 A vs. T 0.067 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs2270190 chr6:31080586 C6orf15 [+250bp] C - 12 A vs. G 0.133 (G) 0.108 (G) >1 (-) 44 (-) >0.05
rs143732531 chr6:31161673 HCG27 [-3864bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs115036790 chr6:31161472 HCG27 [-4065bp] C - 12 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs115741140 chr6:31142417 POU5F1 C - 6 T vs. C - - <1 (-) 36 (-) >0.05
rs12197796 chr6:31071231 C6orf15 [-7769bp] C - 12 T vs. C 0.067 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs9500877 chr6:31159236 HCG27 [-6301bp] C - 12 T vs. C - - <1 (-) 32 (-) >0.05
rs114787895 chr6:31161247 HCG27 [-4290bp] C - 12 T vs. C 0.025 (C) 0.017 (C) <1 (-) 0 (-) >0.05
rs6935662 chr6:31160689 HCG27 [-4848bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs137895370 chr6:31160380 HCG27 [-5157bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs145138290 chr6:31160231 HCG27 [-5306bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs7751130 chr6:31144678 POU5F1 C - 12 T vs. G 0.3 (T) - >1 (-) 11 (-) >0.05
rs116093923 chr6:31159309 HCG27 [-6228bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs138492827 chr6:31154893 POU5F1 [+6385bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9263625 chr6:31075161 C6orf15 [-3839bp] C - 12 A vs. G 0.208 (A) 0.358 (A) >1 (-) 3 (-) >0.05
rs1265084 chr6:31110789 CCHCR1 C - 12 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs9263578 chr6:31069937 C6orf15 [-9063bp] C - 12 A vs. G 0.208 (G) 0.183 (G) >1 (-) 14 (-) >0.05

Association studies for this region [+]