CCHCR1, chr6:31110216-31126015 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7770946 chr6:31144582 POU5F1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs9263497 chr6:31062731 RNU6-1133P [+11845bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs2394416 chr6:31067268 C6orf15 [-11732bp] C - 12 A vs. C - - >1 (-) 19 (-) >0.05
rs3823420 chr6:31101053 PSORS1C1 C - 12 A vs. G 0.042 (A) 0.125 (A) >1 (-) 22 (-) >0.05
rs139652619 chr6:31164810 HCG27 [-727bp] C - 10 T vs. C - - >1 (-) 26 (-) >0.05
rs9263717 chr6:31096526 PSORS1C1 C - 12 A vs. G 0.133 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs13204986 chr6:31100275 PSORS1C1 C - 12 C vs. G 0.067 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs2233977 chr6:31079894 C6orf15 C - 12 A vs. G 0.208 (G) 0.35 (G) <1 (-) 19 (-) >0.05
rs9263634 chr6:31081672 PSORS1C1 [-855bp] C - 11 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs2394419 chr6:31067146 C6orf15 [-11854bp] C - 12 A vs. G - - >1 (-) 3 (-) >0.05
rs720465 chr6:31125777 CCHCR1 C - 12 A vs. C 0.3 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs6906565 chr6:31097814 PSORS1C1 C - 12 T vs. C 0.067 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs117335980 chr6:31114846 CCHCR1 C - 12 A vs. G - 0.017 (A) >1 (-) 0 (-) >0.05
rs17190638 chr6:31113879 CCHCR1 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs57645524 chr6:31160773 HCG27 [-4764bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs130069 chr6:31116245 CCHCR1 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs2284177 chr6:31089595 PSORS1C1 C - 12 C vs. G 0.167 (C) 0.117 (C) >1 (-) 0 (-) >0.05
rs12195316 chr6:31105005 PSORS1C1 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs1265155 chr6:31143694 POU5F1 C - 12 A vs. G 0.308 (A) 0.483 (G) >1 (-) 0 (-) >0.05
rs6929434 chr6:31127947 TCF19 C - 12 A vs. T 0.025 (A) - >1 (-) 0 (-) >0.05
rs116623790 chr6:31120794 CCHCR1 C - 12 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs2233959 chr6:31081065 C6orf15 [+729bp] C - 12 T vs. C 0.325 (C) 0.417 (T) >1 (-) 12 (-) >0.05
rs16898861 chr6:31124491 CCHCR1 C - 12 T vs. C 0.017 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs17197080 chr6:31124211 CCHCR1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs114922326 chr6:31119207 CCHCR1 C - 12 T vs. C 0.025 (T) 0.017 (T) >1 (-) 0 (-) >0.05
rs3819686 chr6:31085824 PSORS1C1 C - 12 A vs. C 0.158 (A) 0.15 (A) >1 (-) 0 (-) >0.05
rs9263508 chr6:31066319 C6orf15 [-12681bp] C - 12 A vs. G 0.208 (A) 0.342 (A) >1 (-) 16 (-) >0.05
rs9501057 chr6:31106516 PSORS1C1 C - 12 T vs. C 0.033 (T) 0.175 (T) >1 (-) 32 (-) >0.05
rs9263703 chr6:31094482 PSORS1C1 C - 12 T vs. G 0.125 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs9263509 chr6:31066419 C6orf15 [-12581bp] C - 12 T vs. C 0.208 (T) 0.217 (T) >1 (-) 8 (-) >0.05
rs12364 chr6:31110786 CCHCR1 C - 11 A vs. T 0.175 (A) 0.1 (A) <1 (-) 5 (-) >0.05
rs141380757 chr6:31110759 CCHCR1 C - 3 T vs. G - - <1 (-) 54 (-) >0.05
rs33941312 chr6:31084191 PSORS1C1 C - 12 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs13196363 chr6:31098391 PSORS1C1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs74499212 chr6:31108110 PSORS1C1 [+241bp] C - 12 T vs. C 0.017 (T) 0.067 (T) <1 (-) 19 (-) >0.05
rs9263506 chr6:31065752 C6orf15 [-13248bp] C - 4 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs9263699 chr6:31093699 PSORS1C1 C - 12 A vs. G 0.125 (A) 0.358 (A) <1 (-) 0 (-) >0.05
rs4084091 chr6:31101401 PSORS1C1 C - 12 T vs. C 0.117 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs3815087 chr6:31093587 PSORS1C1 C - 12 A vs. G 0.125 (A) 0.358 (A) <1 (-) 0 (-) >0.05
rs12199460 chr6:31094728 PSORS1C1 C - 12 A vs. G 0.067 (G) 0.233 (G) >1 (-) 0 (-) >0.05
rs144694558 chr6:31106849 PSORS1C1 C - 9 T vs. C - - >1 (-) 34 (-) >0.05
rs6931633 chr6:31095051 PSORS1C1 C - 12 T vs. C 0.125 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs13201757 chr6:31087060 PSORS1C1 C - 12 T vs. C 0.067 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs62401299 chr6:31146722 POU5F1 C - 12 T vs. C 0.033 (C) 0.092 (C) <1 (-) 39 (-) >0.05
rs3734860 chr6:31097484 PSORS1C1 C - 12 A vs. T 0.042 (A) 0.117 (A) >1 (-) 21 (-) >0.05
rs116399318 chr6:31078664 C6orf15 [-336bp] C - 12 T vs. C - 0.033 (C) <1 (-) 0 (-) >0.05
rs12207756 chr6:31086682 PSORS1C1 C - 12 T vs. C 0.05 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs79527728 chr6:31140909 POU5F1 C - 12 T vs. G - 0.067 (G) >1 (-) 25 (-) >0.05
rs6906449 chr6:31097860 PSORS1C1 C - 12 A vs. C 0.108 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs2240061 chr6:31114848 CCHCR1 C - 12 T vs. C 0.033 (C) 0.175 (C) <1 (-) 42 (-) >0.05

Association studies for this region [+]