CPXM1, chr20:2774715-2781283 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7268763 chr20:2828596 VPS16 All: C 108,990 15 G vs. A 0.292 (G) 0.467 (G) 0.93 (0.90-0.96) 0 (0-37) 9.32e-05
Meta_image?name=rs7268763

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2235813 chr20:2732902 EBF4 C - 12 C vs. G - - <1 (-) 1 (-) >0.05
rs140932655 chr20:2763253 CPXM1 [-11462bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6084163 chr20:2751173 EBF4 [+10420bp] C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs2281318 chr20:2751054 EBF4 [+10301bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs140910589 chr20:2754418 EBF4 [+13665bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs117455978 chr20:2794358 TMEM239 [-1256bp] C - 3 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs6138886 chr20:2739262 EBF4 C - 13 T vs. C 0.158 (T) 0.108 (T) <1 (-) 2 (-) >0.05
rs147724417 chr20:2780401 CPXM1 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs215525 chr20:2761728 CPXM1 [-12987bp] C - 13 T vs. C 0.192 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs2297046 chr20:2821400 PCED1A C - 12 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs144235722 chr20:2770645 CPXM1 [-4070bp] C - 8 A vs. G - - >1 (-) 4 (-) >0.05
rs215532 chr20:2768261 CPXM1 [-6454bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs147271357 chr20:2788630 TMEM239 [-6984bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs215526 chr20:2761922 CPXM1 [-12793bp] C - 13 T vs. G 0.192 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs12626099 chr20:2773452 CPXM1 [-1263bp] C - 13 A vs. G 0.017 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs13042767 chr20:2736104 EBF4 C - 8 C vs. G 0.017 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs215548 chr20:2784833 CPXM1 [+3550bp] C - 13 A vs. C 0.083 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs77137910 chr20:2773725 CPXM1 [-990bp] C - 13 A vs. G 0.017 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs74585874 chr20:2791120 TMEM239 [-4494bp] C - 3 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs215549 chr20:2784976 CPXM1 [+3693bp] C - 13 A vs. G 0.075 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs215554 chr20:2787474 CPXM1 [+6191bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs215522 chr20:2760292 CPXM1 [-14423bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6138885 chr20:2739040 EBF4 C - 13 A vs. G 0.158 (G) 0.108 (G) >1 (-) 2 (-) >0.05
rs215550 chr20:2785092 CPXM1 [+3809bp] C - 13 T vs. C 0.083 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs215546 chr20:2782606 CPXM1 [+1323bp] C - 13 C vs. G 0.075 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs116575841 chr20:2780724 CPXM1 C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs6138900 chr20:2799040 TMEM239 C - 3 C vs. G 0.067 (C) 0.058 (C) <1 (-) 44 (-) >0.05
rs77723216 chr20:2775456 CPXM1 C - 13 A vs. T - 0.192 (A) <1 (-) 0 (-) >0.05
rs2073129 chr20:2779057 CPXM1 C - 13 A vs. G 0.017 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs66809880 chr20:2801040 TMEM239 [+110bp] C - 13 A vs. C 0.267 (A) 0.392 (A) <1 (-) 19 (-) >0.05
rs1985525 chr20:2777459 CPXM1 C - 13 T vs. C 0.083 (T) 0.0 (T) <1 (-) 2 (-) >0.05
rs6037419 chr20:2800208 TMEM239 C - 3 A vs. G 0.05 (A) 0.1 (A) <1 (-) 46 (-) >0.05
rs215516 chr20:2756090 EBF4 [+15337bp] C - 13 T vs. C 0.192 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs76013335 chr20:2780834 CPXM1 C - 13 T vs. C 0.017 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs107130 chr20:2784272 CPXM1 [+2989bp] C - 13 T vs. G 0.083 (T) 0.0 (T) <1 (-) 0 (-) >0.05
rs215542 chr20:2779747 CPXM1 C - 13 A vs. G 0.083 (A) 0.0 (A) <1 (-) 1 (-) >0.05
rs7360412 chr20:2800801 TMEM239 C - 3 A vs. C 0.075 (C) 0.108 (C) >1 (-) 45 (-) >0.05
rs6132966 chr20:2752437 EBF4 [+11684bp] C - 13 A vs. G 0.017 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs215541 chr20:2779257 CPXM1 C - 13 C vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs75930847 chr20:2751596 EBF4 [+10843bp] C - 13 A vs. C - 0.3 (A) <1 (-) 0 (-) >0.05
rs35686544 chr20:2751854 EBF4 [+11101bp] C - 13 T vs. C 0.192 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs215540 chr20:2778363 CPXM1 C - 13 T vs. C 0.083 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs115369950 chr20:2824146 VPS16 C - 3 A vs. C - - >1 (-) 0 (-) >0.05
rs6084164 chr20:2752340 EBF4 [+11587bp] C - 13 A vs. G 0.192 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs57266265 chr20:2748645 EBF4 [+7892bp] C - 13 A vs. G 0.017 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs13043523 chr20:2801577 TMEM239 [+647bp] C - 3 A vs. G 0.033 (A) - <1 (-) 41 (-) >0.05
rs114962805 chr20:2829689 VPS16 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs6115677 chr20:2790117 TMEM239 [-5497bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs6084184 chr20:2812772 PCED1A [-3188bp] C - 13 A vs. G 0.217 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs6051365 chr20:2742491 EBF4 [+1738bp] C - 13 T vs. C 0.033 (C) 0.2 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]