EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs215543 chr20:2780151 CPXM1 C - 13 A vs. G 0.2 (G) 0.417 (G) >1 (-) 0 (-) <0.05
rs215521 chr20:2760044 CPXM1 [-14671bp] C - 13 A vs. G 0.467 (A) 0.467 (G) <1 (-) 0 (-) <0.05
rs742708 chr20:2749334 EBF4 [+8581bp] C - 13 A vs. C 0.442 (C) 0.483 (A) >1 (-) 0 (-) <0.05
rs13044205 chr20:2752608 EBF4 [+11855bp] C - 13 T vs. G 0.075 (T) 0.45 (T) <1 (-) 0 (-) <0.05
rs2064386 chr20:2717636 EBF4 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs215524 chr20:2760835 CPXM1 [-13880bp] C - 13 A vs. G 0.467 (A) 0.467 (G) <1 (-) 0 (-) <0.05
rs35461134 chr20:2752777 EBF4 [+12024bp] C - 13 A vs. T 0.075 (T) 0.442 (T) >1 (-) 0 (-) <0.05
rs215545 chr20:2782015 CPXM1 [+732bp] C - 13 T vs. C 0.2 (T) 0.417 (T) <1 (-) 0 (-) <0.05
rs7268366 chr20:2782522 CPXM1 [+1239bp] C - 13 T vs. C 0.108 (T) 0.225 (T) <1 (-) 0 (-) <0.05
rs67367303 chr20:2773790 CPXM1 [-925bp] C - 13 C vs. G 0.117 (C) 0.425 (C) <1 (-) 0 (-) <0.05
rs215555 chr20:2787651 CPXM1 [+6368bp] C - 13 T vs. C - - >1 (-) 3 (-) <0.05
rs10153972 chr20:2746980 EBF4 [+6227bp] C - 13 A vs. G 0.058 (A) 0.242 (A) <1 (-) 0 (-) <0.05
rs6051381 chr20:2755102 EBF4 [+14349bp] C - 13 T vs. G 0.058 (G) 0.158 (G) >1 (-) 0 (-) <0.05
rs35014305 chr20:2757781 CPXM1 [-16934bp] C - 13 A vs. G 0.058 (A) - <1 (-) 0 (-) <0.05
rs6051378 chr20:2754402 EBF4 [+13649bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs9631167 chr20:2745649 EBF4 [+4896bp] C - 13 A vs. G 0.058 (A) 0.158 (A) <1 (-) 0 (-) <0.05
rs73606175 chr20:2790517 TMEM239 [-5097bp] C - 13 A vs. G 0.108 (G) 0.383 (G) >1 (-) 0 (-) <0.05
rs34211052 chr20:2780683 CPXM1 C - 13 A vs. G 0.1 (A) 0.225 (A) <1 (-) 0 (-) <0.05
rs6107186 chr20:2688131 EBF4 C - 13 A vs. G 0.167 (A) 0.325 (A) >1 (-) 12 (-) <0.05
rs11700173 chr20:2750696 EBF4 [+9943bp] C - 13 A vs. C 0.058 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs6037398 chr20:2755199 EBF4 [+14446bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs8118817 chr20:2679163 EBF4 C - 9 A vs. G 0.133 (G) 0.217 (G) <1 (-) 0 (-) >0.05
rs6132899 chr20:2645262 IDH3B [+397bp] C - 13 A vs. G 0.292 (A) 0.483 (G) >1 (-) 40 (-) >0.05
rs35985906 chr20:2751867 EBF4 [+11114bp] C - 13 T vs. C 0.058 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs2281316 chr20:2751341 EBF4 [+10588bp] C - 13 A vs. G - 0.158 (A) <1 (-) 0 (-) >0.05
rs149487726 chr20:2740262 EBF4 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs117036370 chr20:2754221 EBF4 [+13468bp] C - 10 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs4314064 chr20:2753173 EBF4 [+12420bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs13043754 chr20:2783771 CPXM1 [+2488bp] C - 13 A vs. G 0.117 (G) 0.417 (G) >1 (-) 0 (-) >0.05
rs56054109 chr20:2770535 CPXM1 [-4180bp] C - 13 A vs. G 0.5 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs2422823 chr20:2646333 IDH3B [+1468bp] C - 13 A vs. C 0.358 (A) 0.5 (A) >1 (-) 20 (-) >0.05
rs35895982 chr20:2754627 EBF4 [+13874bp] C - 13 T vs. C 0.058 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs2073130 chr20:2778459 CPXM1 C - 13 A vs. G 0.092 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs6050907 chr20:2632699 NOP56 [-92bp] C - 13 A vs. C 0.367 (A) 0.342 (A) >1 (-) 20 (-) >0.05
rs142167213 chr20:2783873 CPXM1 [+2590bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs79557945 chr20:2751855 EBF4 [+11102bp] C - 12 A vs. G 0.058 (A) - >1 (-) 0 (-) >0.05
rs6051366 chr20:2744438 EBF4 [+3685bp] C - 13 T vs. C 0.275 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs11699662 chr20:2744167 EBF4 [+3414bp] C - 13 T vs. C 0.033 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs13036662 chr20:2784053 CPXM1 [+2770bp] C - 13 A vs. G 0.092 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs215528 chr20:2767147 CPXM1 [-7568bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs2422824 chr20:2647370 IDH3B [+2505bp] C - 13 T vs. C 0.358 (C) 0.492 (T) <1 (-) 18 (-) >0.05
rs11698364 chr20:2773294 CPXM1 [-1421bp] C - 13 A vs. G 0.092 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs117154632 chr20:2768651 CPXM1 [-6064bp] C - 6 A vs. G 0.058 (G) - <1 (-) 0 (-) >0.05
rs2422822 chr20:2645702 IDH3B [+837bp] C - 13 A vs. C 0.292 (A) 0.133 (A) <1 (-) 2 (-) >0.05
rs34845465 chr20:2751794 EBF4 [+11041bp] C - 13 T vs. G 0.075 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs6051377 chr20:2754356 EBF4 [+13603bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs35416652 chr20:2773077 CPXM1 [-1638bp] C - 13 T vs. C 0.083 (C) 0.225 (C) >1 (-) 0 (-) >0.05
rs6037406 chr20:2760842 CPXM1 [-13873bp] C - 13 C vs. G 0.075 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs6051385 chr20:2760954 CPXM1 [-13761bp] C - 13 A vs. T 0.075 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs6115666 chr20:2759467 CPXM1 [-15248bp] C - 13 T vs. G 0.075 (G) 0.158 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.