EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3827074 chr20:2734685 EBF4 C - 12 T vs. C 0.208 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs140364159 chr20:2783872 CPXM1 [+2589bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs2073126 chr20:2728985 EBF4 C - 13 A vs. G 0.442 (G) 0.292 (A) <1 (-) 0 (-) >0.05
rs6084148 chr20:2712329 EBF4 C - 12 T vs. C 0.225 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs140587055 chr20:2692373 EBF4 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs5026120 chr20:2717864 EBF4 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs2875804 chr20:2720921 EBF4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6084154 chr20:2746354 EBF4 [+5601bp] C - 13 A vs. G 0.183 (A) 0.45 (A) <1 (-) 8 (-) >0.05
rs6051374 chr20:2751708 EBF4 [+10955bp] C - 13 A vs. G 0.233 (G) 0.425 (G) >1 (-) 0 (-) >0.05
rs77470526 chr20:2786670 CPXM1 [+5387bp] C - 13 T vs. C - 0.183 (T) <1 (-) 0 (-) >0.05
rs75480902 chr20:2784420 CPXM1 [+3137bp] C - 13 A vs. C - 0.183 (A) <1 (-) 0 (-) >0.05
rs35646473 chr20:2786987 CPXM1 [+5704bp] C - 13 A vs. C - 0.183 (A) <1 (-) 0 (-) >0.05
rs215536 chr20:2772495 CPXM1 [-2220bp] C - 13 T vs. G 0.475 (G) 0.183 (T) >1 (-) 0 (-) >0.05
rs1028407 chr20:2721391 EBF4 C - 13 T vs. C 0.442 (C) 0.292 (T) <1 (-) 0 (-) >0.05
rs80174995 chr20:2652941 IDH3B [+8076bp] C - 8 C vs. G 0.075 (G) - >1 (-) 0 (-) >0.05
rs6083928 chr20:2624844 TMC2 [+2414bp] C - 13 A vs. G - - >1 (-) 43 (-) >0.05
rs12625050 chr20:2788626 TMEM239 [-6988bp] C - 13 T vs. C - 0.175 (T) <1 (-) 0 (-) >0.05
rs6132859 chr20:2624834 TMC2 [+2404bp] C - 13 A vs. C - - <1 (-) 42 (-) >0.05
rs6083930 chr20:2624956 TMC2 [+2526bp] C - 13 A vs. G - - >1 (-) 44 (-) >0.05
rs6050891 chr20:2630156 NOP56 [-2635bp] C - 13 T vs. C 0.325 (C) 0.325 (C) >1 (-) 52 (-) >0.05
rs6050890 chr20:2630111 NOP56 [-2680bp] C - 13 A vs. G 0.325 (G) 0.325 (G) >1 (-) 53 (-) >0.05
rs117880287 chr20:2763401 CPXM1 [-11314bp] C - 3 T vs. G 0.008 (G) - <1 (-) 51 (-) >0.05
rs4365538 chr20:2631225 NOP56 [-1566bp] C - 13 A vs. G 0.317 (G) 0.325 (G) >1 (-) 51 (-) >0.05
rs4815539 chr20:2720035 EBF4 C - 13 A vs. T 0.433 (A) 0.292 (T) >1 (-) 0 (-) >0.05
rs6138887 chr20:2740839 EBF4 [+86bp] C - 13 A vs. C 0.208 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs2038246 chr20:2627370 TMC2 [+4940bp] C - 13 T vs. C 0.4 (T) 0.092 (T) >1 (-) 48 (-) >0.05
rs1883808 chr20:2703692 EBF4 C - 12 A vs. C 0.125 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs144347729 chr20:2753960 EBF4 [+13207bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs4815461 chr20:2629392 NOP56 [-3399bp] C - 12 A vs. G - - <1 (-) 57 (-) >0.05
rs6083929 chr20:2624902 TMC2 [+2472bp] C - 13 A vs. G - - <1 (-) 45 (-) >0.05
rs6050887 chr20:2629981 NOP56 [-2810bp] C - 13 T vs. C - - <1 (-) 53 (-) >0.05
rs16987862 chr20:2630285 NOP56 [-2506bp] C - 13 A vs. G 0.317 (G) 0.325 (G) >1 (-) 52 (-) >0.05
rs2422821 chr20:2630311 NOP56 [-2480bp] C - 13 A vs. G 0.317 (A) 0.325 (A) <1 (-) 52 (-) >0.05
rs6050911 chr20:2634167 NOP56 C - 13 A vs. C 0.325 (A) 0.308 (A) <1 (-) 0 (-) >0.05
rs4815449 chr20:2623872 TMC2 [+1442bp] C - 13 C vs. G 0.417 (C) 0.125 (C) >1 (-) 44 (-) >0.05
rs11698423 chr20:2679501 EBF4 C - 13 A vs. T 0.125 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs6037233 chr20:2627720 NOP56 [-5071bp] C - 13 T vs. C 0.4 (T) - >1 (-) 44 (-) >0.05
rs6051339 chr20:2709659 EBF4 C - 13 A vs. G 0.458 (G) 0.125 (A) <1 (-) 0 (-) >0.05
rs11905421 chr20:2700803 EBF4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs4815456 chr20:2625319 TMC2 [+2889bp] C - 13 T vs. C 0.4 (T) 0.108 (T) >1 (-) 44 (-) >0.05
rs4815455 chr20:2625260 TMC2 [+2830bp] C - 13 A vs. G 0.4 (A) 0.108 (A) >1 (-) 44 (-) >0.05
rs6115609 chr20:2681445 EBF4 C - 5 T vs. G - - <1 (-) 0 (-) >0.05
rs35726342 chr20:2631075 NOP56 [-1716bp] C - 13 A vs. T 0.317 (A) 0.325 (A) <1 (-) 51 (-) >0.05
rs4815453 chr20:2624150 TMC2 [+1720bp] C - 13 A vs. G 0.392 (A) 0.125 (A) >1 (-) 42 (-) >0.05
rs2251051 chr20:2626744 TMC2 [+4314bp] C - 13 T vs. C 0.4 (T) 0.108 (T) >1 (-) 44 (-) >0.05
rs4815451 chr20:2624033 TMC2 [+1603bp] C - 13 A vs. G 0.4 (G) 0.125 (G) <1 (-) 45 (-) >0.05
rs6138646 chr20:2624532 TMC2 [+2102bp] C - 13 A vs. G 0.4 (G) 0.108 (G) <1 (-) 45 (-) >0.05
rs4815452 chr20:2624089 TMC2 [+1659bp] C - 13 T vs. C 0.4 (C) 0.125 (C) <1 (-) 45 (-) >0.05
rs2325898 chr20:2626587 TMC2 [+4157bp] C - 13 T vs. C 0.4 (C) 0.108 (C) <1 (-) 44 (-) >0.05
rs6138893 chr20:2758094 CPXM1 [-16621bp] C - 13 T vs. G - - >1 (-) 11 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.