EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2073197 chr20:2645077 IDH3B [+212bp] C - 13 A vs. G 0.092 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs34057313 chr20:2642665 IDH3B C - 13 A vs. G 0.092 (G) 0.3 (G) <1 (-) 6 (-) >0.05
rs6051346 chr20:2716834 EBF4 C - 13 A vs. C 0.225 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs7270181 chr20:2716617 EBF4 C - 13 A vs. G 0.225 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs6051345 chr20:2716817 EBF4 C - 13 T vs. C 0.225 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs6138886 chr20:2739262 EBF4 C - 13 T vs. C 0.158 (T) 0.108 (T) <1 (-) 2 (-) >0.05
rs6084144 chr20:2710786 EBF4 C - 13 A vs. G 0.225 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs147724417 chr20:2780401 CPXM1 C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs215525 chr20:2761728 CPXM1 [-12987bp] C - 13 T vs. C 0.192 (T) 0.233 (T) <1 (-) 0 (-) >0.05
rs6115368 chr20:2640488 IDH3B C - 13 T vs. C 0.092 (C) 0.3 (C) <1 (-) 6 (-) >0.05
rs1028406 chr20:2721140 EBF4 C - 12 A vs. G 0.308 (G) 0.408 (G) <1 (-) 0 (-) >0.05
rs144235722 chr20:2770645 CPXM1 [-4070bp] C - 8 A vs. G - - >1 (-) 4 (-) >0.05
rs2024555 chr20:2720874 EBF4 C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs215532 chr20:2768261 CPXM1 [-6454bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs6107100 chr20:2644685 IDH3B C - 13 A vs. C 0.092 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs6115381 chr20:2642376 IDH3B C - 13 C vs. G 0.092 (G) 0.3 (G) <1 (-) 5 (-) >0.05
rs6084136 chr20:2693625 EBF4 C - 13 A vs. C 0.275 (C) 0.467 (A) >1 (-) 0 (-) >0.05
rs147271357 chr20:2788630 TMEM239 [-6984bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs215526 chr20:2761922 CPXM1 [-12793bp] C - 13 T vs. G 0.192 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs12626099 chr20:2773452 CPXM1 [-1263bp] C - 13 A vs. G 0.017 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs13042767 chr20:2736104 EBF4 C - 8 C vs. G 0.017 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs215548 chr20:2784833 CPXM1 [+3550bp] C - 13 A vs. C 0.083 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs6051344 chr20:2716129 EBF4 C - 13 T vs. C 0.225 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs77137910 chr20:2773725 CPXM1 [-990bp] C - 13 A vs. G 0.017 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs215549 chr20:2784976 CPXM1 [+3693bp] C - 13 A vs. G 0.075 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs215554 chr20:2787474 CPXM1 [+6191bp] C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs215522 chr20:2760292 CPXM1 [-14423bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs6051348 chr20:2717526 EBF4 C - 9 T vs. C 0.033 (T) 0.133 (T) >1 (-) 55 (-) >0.05
rs8117087 chr20:2701070 EBF4 C - 13 A vs. G 0.225 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs6138885 chr20:2739040 EBF4 C - 13 A vs. G 0.158 (G) 0.108 (G) >1 (-) 2 (-) >0.05
rs215550 chr20:2785092 CPXM1 [+3809bp] C - 13 T vs. C 0.083 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs215546 chr20:2782606 CPXM1 [+1323bp] C - 13 C vs. G 0.075 (G) 0.0 (G) >1 (-) 0 (-) >0.05
rs1883807 chr20:2703621 EBF4 C - 13 A vs. G 0.225 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs6051340 chr20:2714272 EBF4 C - 13 T vs. C 0.125 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs116575841 chr20:2780724 CPXM1 C - 3 A vs. T - - <1 (-) 0 (-) >0.05
rs761330 chr20:2681204 EBF4 C - 13 A vs. G 0.1 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs77723216 chr20:2775456 CPXM1 C - 13 A vs. T - 0.192 (A) <1 (-) 0 (-) >0.05
rs4815540 chr20:2722364 EBF4 C - 13 A vs. G 0.125 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs139734209 chr20:2722296 EBF4 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs2073129 chr20:2779057 CPXM1 C - 13 A vs. G 0.017 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs57779772 chr20:2685565 EBF4 C - 13 T vs. C 0.217 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs6051334 chr20:2702257 EBF4 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1985525 chr20:2777459 CPXM1 C - 13 T vs. C 0.083 (T) 0.0 (T) <1 (-) 2 (-) >0.05
rs6132959 chr20:2685560 EBF4 C - 13 A vs. G 0.225 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs215516 chr20:2756090 EBF4 [+15337bp] C - 13 T vs. C 0.192 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs76013335 chr20:2780834 CPXM1 C - 13 T vs. C 0.017 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs107130 chr20:2784272 CPXM1 [+2989bp] C - 13 T vs. G 0.083 (T) 0.0 (T) <1 (-) 0 (-) >0.05
rs79924539 chr20:2697700 EBF4 C - 9 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs8122666 chr20:2655410 IDH3B [+10545bp] C - 13 T vs. C 0.075 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs4141590 chr20:2682157 EBF4 C - 13 T vs. C 0.1 (T) 0.3 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.