EBF4, chr20:2673524-2740753 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112782677 chr20:2624860 TMC2 [+2430bp] C - 13 A vs. G - - >1 (-) 37 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11699380 chr20:2638492 NOP56 C - 13 A vs. G 0.092 (A) 0.3 (A) >1 (-) 6 (-) >0.05
rs7348645 chr20:2650062 IDH3B [+5197bp] C - 13 C vs. G 0.225 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs11697937 chr20:2638459 NOP56 C - 13 T vs. C 0.092 (C) 0.3 (C) <1 (-) 6 (-) >0.05
rs80151839 chr20:2696131 EBF4 C - 9 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs215542 chr20:2779747 CPXM1 C - 13 A vs. G 0.083 (A) 0.0 (A) <1 (-) 1 (-) >0.05
rs59195127 chr20:2655888 IDH3B [+11023bp] C - 13 T vs. C 0.092 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs4813581 chr20:2626237 TMC2 [+3807bp] C - 13 T vs. C 0.15 (C) - >1 (-) 55 (-) >0.05
rs6132966 chr20:2752437 EBF4 [+11684bp] C - 13 A vs. G 0.017 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs6051341 chr20:2714824 EBF4 C - 13 A vs. T 0.225 (T) 0.317 (T) >1 (-) 0 (-) >0.05
rs6138866 chr20:2685668 EBF4 C - 13 T vs. C 0.225 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs13043423 chr20:2703999 EBF4 C - 13 A vs. T - - <1 (-) 0 (-) >0.05
rs215541 chr20:2779257 CPXM1 C - 13 C vs. G 0.092 (G) - >1 (-) 0 (-) >0.05
rs8125340 chr20:2652784 IDH3B [+7919bp] C - 13 T vs. C 0.092 (C) 0.325 (C) <1 (-) 0 (-) >0.05
rs75930847 chr20:2751596 EBF4 [+10843bp] C - 13 A vs. C - 0.3 (A) <1 (-) 0 (-) >0.05
rs79388450 chr20:2707354 EBF4 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs8119307 chr20:2706447 EBF4 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs73892656 chr20:2709287 EBF4 C - 9 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs35686544 chr20:2751854 EBF4 [+11101bp] C - 13 T vs. C 0.192 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs80023036 chr20:2699607 EBF4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs79049619 chr20:2705316 EBF4 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs60946884 chr20:2685467 EBF4 C - 13 T vs. C 0.225 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs215540 chr20:2778363 CPXM1 C - 13 T vs. C 0.083 (C) 0.0 (C) >1 (-) 0 (-) >0.05
rs114818994 chr20:2627733 NOP56 [-5058bp] C - 8 C vs. G - - >1 (-) 21 (-) >0.05
rs6084164 chr20:2752340 EBF4 [+11587bp] C - 13 A vs. G 0.192 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs57266265 chr20:2748645 EBF4 [+7892bp] C - 13 A vs. G 0.017 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs8121472 chr20:2657566 IDH3B [+12701bp] C - 13 T vs. C 0.092 (C) 0.325 (C) <1 (-) 0 (-) >0.05
rs11087555 chr20:2689209 EBF4 C - 13 A vs. G 0.125 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2273137 chr20:2635212 NOP56 C - 13 A vs. G 0.092 (G) 0.292 (G) <1 (-) 8 (-) >0.05
rs3818060 chr20:2635012 NOP56 C - 13 T vs. G 0.092 (G) 0.292 (G) <1 (-) 8 (-) >0.05
rs11700370 chr20:2627755 NOP56 [-5036bp] C - 13 T vs. C 0.208 (T) 0.217 (T) <1 (-) 58 (-) >0.05
rs111783626 chr20:2713548 EBF4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs9680034 chr20:2631921 NOP56 [-870bp] C - 13 A vs. G 0.092 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs59490935 chr20:2643604 IDH3B C - 13 A vs. T 0.092 (T) 0.3 (T) <1 (-) 5 (-) >0.05
rs75987877 chr20:2712189 EBF4 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs7267990 chr20:2715447 EBF4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs6115677 chr20:2790117 TMEM239 [-5497bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs4815533 chr20:2684924 EBF4 C - 13 A vs. G 0.425 (G) 0.408 (A) <1 (-) 0 (-) >0.05
rs2024556 chr20:2685209 EBF4 C - 13 T vs. C 0.367 (C) 0.417 (T) <1 (-) 0 (-) >0.05
rs6051329 chr20:2695946 EBF4 C - 13 T vs. C 0.117 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs6051365 chr20:2742491 EBF4 [+1738bp] C - 13 T vs. C 0.033 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs2002697 chr20:2718493 EBF4 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs6051332 chr20:2701418 EBF4 C - 13 A vs. G 0.225 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs73892653 chr20:2694868 EBF4 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs6084135 chr20:2686027 EBF4 C - 13 A vs. C 0.225 (C) 0.392 (C) >1 (-) 0 (-) >0.05
rs35497168 chr20:2630274 NOP56 [-2517bp] C - 13 A vs. C 0.092 (C) 0.308 (C) <1 (-) 0 (-) >0.05
rs4815536 chr20:2685167 EBF4 C - 13 T vs. C 0.4 (T) 0.408 (C) >1 (-) 0 (-) >0.05
rs8121831 chr20:2691964 EBF4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs8115154 chr20:2691654 EBF4 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs12480791 chr20:2697782 EBF4 C - 13 T vs. C 0.117 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs6051393 chr20:2766568 CPXM1 [-8147bp] C - 13 A vs. G 0.2 (A) 0.35 (A) <1 (-) 25 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.