ELK4, chr1:205577071-205601090 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs868844 chr1:205646646 SLC45A3 All: C 108,990 15 G vs. A 0.308 (G) 0.442 (G) 0.92 (0.89-0.96) 28 (0-61) 1.25e-05
Meta_image?name=rs868844

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11240541 chr1:205594652 ELK4 C - 13 C vs. G 0.058 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs11240540 chr1:205581853 ELK4 C - 13 T vs. C 0.033 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs114839945 chr1:205529597 RNU2-19P [-6247bp] C - 7 T vs. C 0.008 (C) - >1 (-) 30 (-) >0.05
rs142077185 chr1:205641216 SLC45A3 C - 10 A vs. T - - <1 (-) 0 (-) >0.05
rs115642143 chr1:205603174 ELK4 [+2084bp] C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs74931401 chr1:205571840 MFSD4 C - 13 C vs. G 0.033 (C) - >1 (-) 0 (-) >0.05
rs74144434 chr1:205606073 ELK4 [+4983bp] C - 13 A vs. G 0.15 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs12025838 chr1:205600085 ELK4 C - 12 T vs. G 0.025 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs112245398 chr1:205531518 RNU2-19P [-4326bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs148997803 chr1:205563710 MFSD4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
chr1:205527733 chr1:205527733 RNU2-19P [-8111bp] C - 8 A vs. G - - <1 (-) 9 (-) >0.05
rs138401063 chr1:205547505 MFSD4 C - 9 A vs. T - - >1 (-) 0 (-) >0.05
rs4951014 chr1:205571793 MFSD4 C - 13 A vs. G 0.125 (G) 0.35 (A) >1 (-) 15 (-) >0.05
rs79677312 chr1:205611143 ELK4 [+10053bp] C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs11240547 chr1:205632932 SLC45A3 C - 13 A vs. G 0.325 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs16856019 chr1:205571467 MFSD4 C - 13 T vs. C 0.125 (T) 0.35 (C) <1 (-) 14 (-) >0.05
rs144414741 chr1:205585863 ELK4 C - 6 T vs. C - - <1 (-) 43 (-) >0.05
rs41304251 chr1:205631522 SLC45A3 C - 13 T vs. C - - >1 (-) 33 (-) >0.05
rs2867891 chr1:205598979 ELK4 C - 13 A vs. G 0.1 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs6677703 chr1:205558976 MFSD4 C - 13 A vs. G 0.4 (A) 0.375 (G) <1 (-) 4 (-) >0.05
rs61822874 chr1:205535684 RNU2-19P [-160bp] C - 13 T vs. C 0.025 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs77858758 chr1:205530284 RNU2-19P [-5560bp] C - 3 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs56960802 chr1:205565159 MFSD4 C - 11 T vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs144171663 chr1:205616555 SLC45A3 [-10424bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs3789461 chr1:205588637 ELK4 C - 13 T vs. C 0.058 (T) 0.358 (T) <1 (-) 18 (-) >0.05
rs6658344 chr1:205544694 MFSD4 C - 13 A vs. G 0.183 (G) 0.15 (G) <1 (-) 9 (-) >0.05
rs1891506 chr1:205543862 MFSD4 C - 13 A vs. G 0.175 (G) 0.142 (G) <1 (-) 5 (-) >0.05
rs2153902 chr1:205616763 SLC45A3 [-10216bp] C - 12 T vs. G 0.333 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs1418652 chr1:205646458 SLC45A3 C - 13 T vs. C 0.35 (C) 0.192 (T) >1 (-) 0 (-) >0.05
rs6593963 chr1:205641018 SLC45A3 C - 4 A vs. G 0.0 (G) - >1 (-) 0 (-) >0.05
rs112754568 chr1:205622385 SLC45A3 [-4594bp] C - 12 T vs. C 0.025 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs113807012 chr1:205622381 SLC45A3 [-4598bp] C - 12 A vs. T - 0.017 (A) >1 (-) 0 (-) >0.05
rs12407348 chr1:205573960 MFSD4 [+1914bp] C - 13 T vs. G - - >1 (-) 18 (-) >0.05
rs115770308 chr1:205536292 RNU2-19P [+365bp] C - 8 A vs. G 0.025 (A) - <1 (-) 30 (-) >0.05
rs55737952 chr1:205566279 MFSD4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs58128026 chr1:205566622 MFSD4 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs76935849 chr1:205621684 SLC45A3 [-5295bp] C - 12 T vs. C - 0.017 (T) >1 (-) 0 (-) >0.05
rs140212590 chr1:205531772 RNU2-19P [-4072bp] C - 7 T vs. C - - <1 (-) 13 (-) >0.05
rs12036780 chr1:205542874 MFSD4 C - 13 A vs. C 0.442 (A) 0.025 (C) <1 (-) 0 (-) >0.05
rs151045305 chr1:205626548 SLC45A3 [-431bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs79637404 chr1:205618730 SLC45A3 [-8249bp] C - 12 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs140085354 chr1:205648550 SLC45A3 C - 3 T vs. G - - <1 (-) 0 (-) >0.05
rs6593961 chr1:205619544 SLC45A3 [-7435bp] C - 12 T vs. G 0.033 (T) - >1 (-) 0 (-) >0.05
rs113418196 chr1:205620585 SLC45A3 [-6394bp] C - 12 A vs. C 0.033 (A) - >1 (-) 0 (-) >0.05
rs1418653 chr1:205646278 SLC45A3 C - 13 A vs. C 0.425 (C) 0.175 (A) >1 (-) 0 (-) >0.05
rs112871603 chr1:205620494 SLC45A3 [-6485bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7555438 chr1:205570959 MFSD4 C - 13 T vs. C - - >1 (-) 19 (-) >0.05
rs114269266 chr1:205618596 SLC45A3 [-8383bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs41308411 chr1:205568216 MFSD4 C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs79314271 chr1:205548777 MFSD4 C - 13 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05

Association studies for this region [+]