MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05
rs146088191 chr1:205603775 ELK4 [+2685bp] C - 3 T vs. C - - <1 (-) 3 (-) <0.05
rs11240505 chr1:205499921 CDK18 C - 13 C vs. G 0.108 (G) 0.317 (G) >1 (-) 38 (-) <0.05
rs41264891 chr1:205499595 CDK18 C - 13 A vs. G 0.108 (A) 0.317 (A) <1 (-) 40 (-) <0.05
rs12035825 chr1:205499495 CDK18 C - 13 A vs. G 0.108 (A) 0.308 (A) <1 (-) 40 (-) <0.05
rs11240506 chr1:205500203 CDK18 C - 13 A vs. T 0.117 (T) 0.308 (T) >1 (-) 41 (-) <0.05
rs10494871 chr1:205552864 MFSD4 C - 13 A vs. G 0.083 (A) 0.167 (A) <1 (-) 14 (-) <0.05
rs116344772 chr1:205564482 MFSD4 C - 13 A vs. G 0.008 (A) - >1 (-) 3 (-) <0.05
rs16855869 chr1:205513384 CDK18 [+11463bp] C - 13 T vs. C 0.15 (C) 0.067 (C) >1 (-) 35 (-) <0.05
rs11581303 chr1:205608153 ELK4 [+7063bp] C - 13 A vs. G 0.3 (G) 0.383 (G) >1 (-) 0 (-) <0.05
rs12746159 chr1:205609672 ELK4 [+8582bp] C - 13 C vs. G 0.283 (G) 0.375 (G) >1 (-) 3 (-) <0.05
rs6656684 chr1:205575055 ELK4 [-2016bp] C - 13 T vs. C - - <1 (-) 7 (-) <0.05
rs7518313 chr1:205606850 ELK4 [+5760bp] C - 13 T vs. C 0.3 (T) 0.375 (T) <1 (-) 0 (-) <0.05
rs11577251 chr1:205590152 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs6668187 chr1:205575535 ELK4 [-1536bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12036666 chr1:205618659 SLC45A3 [-8320bp] C - 13 A vs. G - 0.25 (A) <1 (-) 0 (-) >0.05
rs4951251 chr1:205617852 SLC45A3 [-9127bp] C - 13 T vs. C 0.033 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs3795550 chr1:205563162 MFSD4 C - 12 T vs. C 0.2 (C) 0.308 (T) >1 (-) 50 (-) >0.05
rs12744379 chr1:205612080 ELK4 [+10990bp] C - 13 T vs. G 0.033 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs11580704 chr1:205606982 ELK4 [+5892bp] C - 13 T vs. G 0.333 (T) - >1 (-) 11 (-) >0.05
rs11590243 chr1:205586249 ELK4 C - 10 C vs. G 0.058 (C) - >1 (-) 0 (-) >0.05
rs13757 chr1:205601199 ELK4 [+109bp] C - 13 A vs. G 0.342 (A) - >1 (-) 0 (-) >0.05
rs12727646 chr1:205503250 CDK18 [+1329bp] C - 13 T vs. C 0.275 (C) 0.308 (C) >1 (-) 13 (-) >0.05
rs1114126 chr1:205606172 ELK4 [+5082bp] C - 13 A vs. G 0.158 (G) 0.467 (G) >1 (-) 0 (-) >0.05
rs12039255 chr1:205609010 ELK4 [+7920bp] C - 13 T vs. C 0.033 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs60890169 chr1:205612646 ELK4 [+11556bp] C - 13 T vs. C 0.325 (T) - >1 (-) 6 (-) >0.05
rs111519240 chr1:205620884 SLC45A3 [-6095bp] C - 13 A vs. G - - <1 (-) 15 (-) >0.05
rs4951235 chr1:205498343 CDK18 C - 13 C vs. G 0.058 (G) 0.233 (G) >1 (-) 38 (-) >0.05
rs1000312 chr1:205505477 CDK18 [+3556bp] C - 13 A vs. G 0.283 (A) 0.408 (A) <1 (-) 25 (-) >0.05
rs12568602 chr1:205509027 CDK18 [+7106bp] C - 13 T vs. C 0.267 (T) 0.283 (T) <1 (-) 18 (-) >0.05
rs4951238 chr1:205516697 CDK18 [+14776bp] C - 13 A vs. G - - >1 (-) 8 (-) >0.05
rs111942467 chr1:205620895 SLC45A3 [-6084bp] C - 13 A vs. G - - <1 (-) 16 (-) >0.05
rs72750910 chr1:205598912 ELK4 C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs139936227 chr1:205536643 RNU2-19P [+716bp] C - 11 A vs. G - - <1 (-) 9 (-) >0.05
rs1064406 chr1:205589574 ELK4 C - 13 T vs. C 0.025 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs12036582 chr1:205503168 CDK18 [+1247bp] C - 13 T vs. C 0.275 (C) 0.308 (C) >1 (-) 16 (-) >0.05
rs10751441 chr1:205514746 CDK18 [+12825bp] C - 13 A vs. G 0.267 (A) 0.033 (A) >1 (-) 15 (-) >0.05
rs7526132 chr1:205554085 MFSD4 C - 13 C vs. G 0.425 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs12748821 chr1:205499701 CDK18 C - 13 T vs. C 0.125 (C) 0.342 (C) >1 (-) 21 (-) >0.05
rs6593957 chr1:205600653 ELK4 C - 13 T vs. C - - >1 (-) 38 (-) >0.05
rs2185811 chr1:205596870 ELK4 C - 13 T vs. C 0.025 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs34193126 chr1:205596327 ELK4 C - 13 T vs. C 0.025 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs12048218 chr1:205594936 ELK4 C - 13 A vs. T - - >1 (-) 0 (-) >0.05
rs12042887 chr1:205499355 CDK18 C - 13 A vs. C 0.125 (A) 0.342 (A) <1 (-) 21 (-) >0.05
rs12048882 chr1:205594617 ELK4 C - 13 T vs. C 0.025 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs34310773 chr1:205592698 ELK4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs2867887 chr1:205521075 RNU2-19P [-14769bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2868563 chr1:205506961 CDK18 [+5040bp] C - 13 A vs. G 0.275 (G) 0.3 (G) >1 (-) 13 (-) >0.05
rs35219050 chr1:205584387 ELK4 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs12131221 chr1:205502137 CDK18 [+216bp] C - 13 T vs. C 0.275 (C) 0.308 (C) >1 (-) 16 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.