HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1052409 chr6:31362207 MICA [-9149bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs12174396 chr6:31374579 MICA C - 10 A vs. G 0.075 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs28366143 chr6:31364832 MICA [-6524bp] C - 12 A vs. C - - >1 (-) 46 (-) >0.05
rs113997511 chr6:31274070 HLA-C [+34163bp] C - 11 A vs. G 0.008 (A) 0.092 (A) >1 (-) 20 (-) >0.05
rs3997901 chr6:31342156 RNU6-283P [+4139bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs6920323 chr6:31352060 RNU6-283P [+14043bp] C - 11 T vs. C 0.15 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs28367698 chr6:31284291 HLA-B [-37358bp] C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs9266381 chr6:31334792 RNU6-283P [-3119bp] C - 12 T vs. C 0.175 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs2523541 chr6:31335234 RNU6-283P [-2677bp] C - 12 A vs. C 0.175 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs9266386 chr6:31335082 RNU6-283P [-2829bp] C - 12 T vs. C 0.175 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs9266385 chr6:31335005 RNU6-283P [-2906bp] C - 12 T vs. C 0.175 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs9266409 chr6:31336568 RNU6-283P [-1343bp] C - 12 T vs. C 0.175 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs9266384 chr6:31334993 RNU6-283P [-2918bp] C - 12 T vs. G 0.175 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs116234817 chr6:31321364 HLA-B [-285bp] C - 3 A vs. G 0.042 (A) 0.025 (A) >1 (-) 30 (-) >0.05
rs9266383 chr6:31334987 RNU6-283P [-2924bp] C - 12 A vs. G 0.175 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs9266722 chr6:31349922 RNU6-283P [+11905bp] C - 11 T vs. C 0.083 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs9266382 chr6:31334877 RNU6-283P [-3034bp] C - 12 A vs. C 0.175 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs16899241 chr6:31273703 HLA-C [+33796bp] C - 11 T vs. C 0.025 (T) 0.1 (T) >1 (-) 20 (-) >0.05
rs9266402 chr6:31335933 RNU6-283P [-1978bp] C - 12 A vs. C 0.175 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs9266406 chr6:31336418 RNU6-283P [-1493bp] C - 12 A vs. G 0.175 (A) 0.342 (A) <1 (-) 0 (-) >0.05
rs9266404 chr6:31336223 RNU6-283P [-1688bp] C - 11 T vs. G 0.175 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs9266392 chr6:31335403 RNU6-283P [-2508bp] C - 12 A vs. G 0.175 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs9266413 chr6:31336840 RNU6-283P [-1071bp] C - 12 A vs. G 0.175 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs9266448 chr6:31338154 RNU6-283P [+137bp] C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs144774207 chr6:31362825 MICA [-8531bp] C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs12664384 chr6:31272892 HLA-C [+32985bp] C - 11 T vs. C 0.033 (T) 0.1 (T) >1 (-) 21 (-) >0.05
rs2005423 chr6:31359316 MICA [-12040bp] C - 4 T vs. C 0.175 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs72883110 chr6:31366969 MICA [-4387bp] C - 10 T vs. C 0.05 (C) 0.1 (C) <1 (-) 59 (-) >0.05
rs9295986 chr6:31338528 RNU6-283P [+511bp] C - 12 T vs. C 0.142 (T) 0.425 (T) <1 (-) 0 (-) >0.05
rs34196875 chr6:31275603 HLA-C [+35696bp] C - 11 C vs. G 0.125 (C) 0.167 (C) <1 (-) 8 (-) >0.05
rs114000349 chr6:31273540 HLA-C [+33633bp] C - 11 T vs. C 0.025 (T) 0.1 (T) >1 (-) 21 (-) >0.05
rs9266252 chr6:31325822 HLA-B [+857bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs9266418 chr6:31337005 RNU6-283P [-906bp] C - 12 C vs. G 0.167 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs34907473 chr6:31311938 HLA-B [-9711bp] C - 3 A vs. G 0.267 (G) 0.383 (G) >1 (-) 0 (-) >0.05
rs28380921 chr6:31315049 HLA-B [-6600bp] C - 4 A vs. T - - >1 (-) 30 (-) >0.05
rs148594605 chr6:31362826 MICA [-8530bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs116382538 chr6:31328972 HLA-B [+4007bp] C - 6 T vs. G 0.042 (T) 0.108 (T) <1 (-) 43 (-) >0.05
rs62396278 chr6:31329119 HLA-B [+4154bp] C - 6 T vs. C 0.033 (C) 0.108 (C) >1 (-) 42 (-) >0.05
rs62396276 chr6:31328762 HLA-B [+3797bp] C - 6 A vs. G - - >1 (-) 42 (-) >0.05
rs149817292 chr6:31362819 MICA [-8537bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs9266423 chr6:31337147 RNU6-283P [-764bp] C - 12 T vs. C 0.175 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs9266429 chr6:31337256 RNU6-283P [-655bp] C - 12 T vs. C 0.175 (C) 0.35 (C) >1 (-) 0 (-) >0.05
rs62396280 chr6:31329478 HLA-B [+4513bp] C - 6 A vs. G 0.05 (A) 0.15 (A) <1 (-) 43 (-) >0.05
rs35672615 chr6:31274890 HLA-C [+34983bp] C - 11 T vs. G - - <1 (-) 9 (-) >0.05
rs9266262 chr6:31325932 HLA-B [+967bp] C - 8 A vs. G 0.358 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs9501380 chr6:31341656 RNU6-283P [+3639bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs9266420 chr6:31337115 RNU6-283P [-796bp] C - 12 C vs. G 0.175 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs2523582 chr6:31328092 HLA-B [+3127bp] C - 9 A vs. G 0.317 (A) - >1 (-) 0 (-) >0.05
rs35624930 chr6:31272251 HLA-C [+32344bp] C - 11 T vs. C 0.125 (C) 0.167 (C) >1 (-) 7 (-) >0.05
rs2394992 chr6:31359251 MICA [-12105bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]