HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3887376 chr6:31281280 HLA-B [-40369bp] C - 4 A vs. G 0.1 (G) 0.108 (G) <1 (-) 14 (-) >0.05
rs9266289 chr6:31328756 HLA-B [+3791bp] C - 8 A vs. G - - <1 (-) 0 (-) >0.05
rs10484557 chr6:31284253 HLA-B [-37396bp] C - 4 C vs. G 0.092 (G) 0.117 (G) <1 (-) 14 (-) >0.05
rs9266361 chr6:31332919 RNU6-283P [-4992bp] C - 12 T vs. C 0.375 (T) 0.275 (C) <1 (-) 14 (-) >0.05
rs2251396 chr6:31364707 MICA [-6649bp] C - 11 A vs. G 0.35 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs2523569 chr6:31329921 HLA-B [+4956bp] C - 10 T vs. G 0.192 (G) 0.125 (G) >1 (-) 14 (-) >0.05
rs116583816 chr6:31326123 HLA-B [+1158bp] C - 7 C vs. G 0.192 (C) - >1 (-) 42 (-) >0.05
rs3132478 chr6:31282462 HLA-B [-39187bp] C - 3 A vs. G 0.317 (G) 0.4 (A) <1 (-) 0 (-) >0.05
rs7761068 chr6:31333939 RNU6-283P [-3972bp] C - 12 A vs. G 0.375 (G) 0.258 (A) >1 (-) 15 (-) >0.05
rs2250284 chr6:31330139 HLA-B [+5174bp] C - 10 A vs. G 0.2 (G) 0.125 (G) >1 (-) 17 (-) >0.05
rs2394968 chr6:31281586 HLA-B [-40063bp] C - 4 T vs. G 0.108 (T) 0.108 (T) >1 (-) 14 (-) >0.05
rs2395476 chr6:31327382 HLA-B [+2417bp] C - 9 T vs. G 0.392 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs2428496 chr6:31322121 HLA-B C - 7 T vs. C 0.217 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs34429926 chr6:31319397 HLA-B [-2252bp] C - 4 A vs. G 0.133 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs6457378 chr6:31280970 HLA-B [-40679bp] C - 4 T vs. C 0.108 (T) 0.1 (T) >1 (-) 14 (-) >0.05
rs7753449 chr6:31280780 HLA-B [-40869bp] C - 4 A vs. T 0.108 (A) 0.1 (A) >1 (-) 14 (-) >0.05
rs28367690 chr6:31276657 HLA-C [+36750bp] C - 11 A vs. G 0.208 (G) 0.317 (G) <1 (-) 0 (-) >0.05
rs2523457 chr6:31365707 MICA [-5649bp] C - 12 A vs. G 0.367 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs3016014 chr6:31351153 RNU6-283P [+13136bp] C - 12 A vs. G 0.325 (G) 0.075 (G) <1 (-) 57 (-) >0.05
rs9501588 chr6:31347020 RNU6-283P [+9003bp] C - 12 A vs. G 0.183 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs2523451 chr6:31369151 MICA [-2205bp] C - 12 A vs. G 0.358 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs9266232 chr6:31325424 HLA-B [+459bp] C - 5 T vs. G 0.375 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs2844537 chr6:31348935 RNU6-283P [+10918bp] C - 12 A vs. C 0.275 (C) 0.108 (C) <1 (-) 0 (-) >0.05
rs9266271 chr6:31326082 HLA-B [+1117bp] C - 6 T vs. C 0.317 (C) 0.258 (C) <1 (-) 46 (-) >0.05
rs2523455 chr6:31367077 MICA [-4279bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2523570 chr6:31329734 HLA-B [+4769bp] C - 10 T vs. C 0.233 (T) 0.075 (T) >1 (-) 41 (-) >0.05
rs2301749 chr6:31371355 MICA [-1bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs114777460 chr6:31325443 HLA-B [+478bp] C - 4 A vs. G 0.058 (G) 0.067 (G) >1 (-) 26 (-) >0.05
rs3873393 chr6:31334265 RNU6-283P [-3646bp] C - 8 T vs. C 0.1 (C) - >1 (-) 0 (-) >0.05
rs9264904 chr6:31272553 HLA-C [+32646bp] C - 12 A vs. G 0.275 (A) 0.117 (A) <1 (-) 0 (-) >0.05
rs2596500 chr6:31321267 HLA-B [-382bp] C - 5 A vs. C 0.142 (C) - >1 (-) 27 (-) >0.05
rs9265704 chr6:31301842 HLA-B [-19807bp] C - 5 A vs. T 0.467 (T) 0.492 (A) <1 (-) 53 (-) >0.05
rs146621668 chr6:31374521 MICA C - 3 A vs. C - - >1 (-) 0 (-) >0.05
rs9405083 chr6:31319489 HLA-B [-2160bp] C - 8 T vs. C 0.275 (T) 0.475 (C) <1 (-) 0 (-) >0.05
rs9265605 chr6:31299472 HLA-B [-22177bp] C - 5 A vs. G 0.433 (G) 0.5 (G) <1 (-) 59 (-) >0.05
rs9380242 chr6:31272392 HLA-C [+32485bp] C - 11 A vs. G 0.008 (A) 0.15 (A) <1 (-) 0 (-) >0.05
rs9265604 chr6:31299450 HLA-B [-22199bp] C - 5 T vs. C 0.45 (C) 0.5 (C) <1 (-) 58 (-) >0.05
rs9266236 chr6:31325513 HLA-B [+548bp] C - 5 C vs. G - - >1 (-) 0 (-) >0.05
rs9266233 chr6:31325430 HLA-B [+465bp] C - 4 A vs. G 0.367 (A) 0.317 (G) <1 (-) 0 (-) >0.05
rs142973694 chr6:31362941 MICA [-8415bp] C - 6 A vs. G - - >1 (-) 65 (-) >0.05
rs2395477 chr6:31342212 RNU6-283P [+4195bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs73728860 chr6:31313882 HLA-B [-7767bp] C - 4 T vs. G 0.05 (T) - >1 (-) 0 (-) >0.05
rs73728863 chr6:31314224 HLA-B [-7425bp] C - 4 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs73728862 chr6:31314150 HLA-B [-7499bp] C - 4 A vs. G 0.05 (A) - >1 (-) 0 (-) >0.05
rs9295988 chr6:31373718 MICA C - 11 C vs. G 0.058 (G) 0.083 (G) >1 (-) 12 (-) >0.05
rs2442710 chr6:31339260 RNU6-283P [+1243bp] C - 10 T vs. G 0.342 (T) - >1 (-) 8 (-) >0.05
rs2442711 chr6:31339261 RNU6-283P [+1244bp] C - 10 A vs. T 0.342 (T) - <1 (-) 8 (-) >0.05
rs9501571 chr6:31333610 RNU6-283P [-4301bp] C - 12 T vs. C 0.1 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs2428495 chr6:31322175 HLA-B C - 7 T vs. C 0.225 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs114088084 chr6:31314095 HLA-B [-7554bp] C - 4 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]