HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9265665 chr6:31300711 HLA-B [-20938bp] C - 5 A vs. C 0.483 (C) 0.492 (C) <1 (-) 60 (-) >0.05
rs9265908 chr6:31313677 HLA-B [-7972bp] C - 6 T vs. C 0.142 (T) - <1 (-) 2 (-) >0.05
rs9265937 chr6:31314938 HLA-B [-6711bp] C - 6 T vs. C 0.125 (T) 0.05 (T) <1 (-) 2 (-) >0.05
rs2507998 chr6:31314652 HLA-B [-6997bp] C - 6 A vs. G 0.142 (G) 0.05 (G) >1 (-) 2 (-) >0.05
rs7749555 chr6:31314274 HLA-B [-7375bp] C - 6 A vs. G 0.142 (G) 0.05 (G) >1 (-) 2 (-) >0.05
rs9265700 chr6:31301615 HLA-B [-20034bp] C - 5 T vs. C 0.442 (C) 0.5 (C) <1 (-) 52 (-) >0.05
rs9266230 chr6:31325341 HLA-B [+376bp] C - 3 C vs. G 0.375 (G) - <1 (-) 0 (-) >0.05
rs115233188 chr6:31348771 RNU6-283P [+10754bp] C - 10 A vs. G 0.033 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs73728872 chr6:31315146 HLA-B [-6503bp] C - 5 T vs. G - - <1 (-) 0 (-) >0.05
rs2596566 chr6:31350822 RNU6-283P [+12805bp] C - 12 T vs. G 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs12662617 chr6:31328685 HLA-B [+3720bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs9391843 chr6:31316910 HLA-B [-4739bp] C - 6 A vs. T 0.075 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs9266258 chr6:31325912 HLA-B [+947bp] C - 6 T vs. C 0.192 (C) 0.033 (C) <1 (-) 40 (-) >0.05
rs9265948 chr6:31315193 HLA-B [-6456bp] C - 6 T vs. C 0.142 (T) 0.05 (T) <1 (-) 2 (-) >0.05
rs2523547 chr6:31350154 RNU6-283P [+12137bp] C - 12 T vs. C 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs2596567 chr6:31350314 RNU6-283P [+12297bp] C - 12 C vs. G 0.083 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs114798915 chr6:31337020 RNU6-283P [-891bp] C - 5 A vs. G 0.033 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs115258500 chr6:31352853 RNU6-283P [+14836bp] C - 10 A vs. G 0.025 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs2523613 chr6:31320687 HLA-B [-962bp] C - 4 A vs. C 0.125 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs9265694 chr6:31301466 HLA-B [-20183bp] C - 5 C vs. G 0.425 (G) 0.492 (C) <1 (-) 54 (-) >0.05
rs9266684 chr6:31348505 RNU6-283P [+10488bp] C - 12 T vs. C 0.367 (T) 0.417 (T) >1 (-) 0 (-) >0.05
rs2394981 chr6:31313029 HLA-B [-8620bp] C - 6 T vs. G 0.125 (T) 0.033 (T) <1 (-) 2 (-) >0.05
rs9265698 chr6:31301537 HLA-B [-20112bp] C - 5 T vs. C 0.442 (T) 0.5 (T) >1 (-) 52 (-) >0.05
rs114994210 chr6:31352900 RNU6-283P [+14883bp] C - 10 C vs. G 0.025 (G) 0.117 (G) <1 (-) 0 (-) >0.05
rs9265827 chr6:31311318 HLA-B [-10331bp] C - 6 A vs. G - - >1 (-) 7 (-) >0.05
rs62395441 chr6:31347214 RNU6-283P [+9197bp] C - 10 A vs. G 0.042 (A) 0.108 (A) <1 (-) 14 (-) >0.05
rs9265910 chr6:31313722 HLA-B [-7927bp] C - 6 T vs. C 0.142 (T) 0.05 (T) <1 (-) 1 (-) >0.05
rs12664131 chr6:31328582 HLA-B [+3617bp] C - 8 A vs. T - - >1 (-) 0 (-) >0.05
rs9265886 chr6:31313221 HLA-B [-8428bp] C - 6 A vs. C 0.083 (C) - >1 (-) 3 (-) >0.05
rs9265693 chr6:31301444 HLA-B [-20205bp] C - 5 T vs. C 0.433 (T) 0.492 (C) >1 (-) 53 (-) >0.05
rs2844567 chr6:31336644 RNU6-283P [-1267bp] C - 10 A vs. G 0.083 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs9266689 chr6:31348580 RNU6-283P [+10563bp] C - 12 A vs. G 0.358 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs9265690 chr6:31301371 HLA-B [-20278bp] C - 5 T vs. C 0.45 (T) 0.492 (C) >1 (-) 53 (-) >0.05
rs9265616 chr6:31299651 HLA-B [-21998bp] C - 5 T vs. C 0.425 (T) 0.483 (C) >1 (-) 58 (-) >0.05
rs73730047 chr6:31271933 HLA-C [+32026bp] C - 8 T vs. G - - <1 (-) 39 (-) >0.05
rs9265831 chr6:31311449 HLA-B [-10200bp] C - 6 A vs. T 0.15 (A) - <1 (-) 8 (-) >0.05
rs2394980 chr6:31312941 HLA-B [-8708bp] C - 6 T vs. C 0.133 (T) 0.05 (T) <1 (-) 3 (-) >0.05
rs4713451 chr6:31272581 HLA-C [+32674bp] C - 11 T vs. C 0.1 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs2507980 chr6:31347877 RNU6-283P [+9860bp] C - 12 A vs. G 0.083 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs2523637 chr6:31344670 RNU6-283P [+6653bp] C - 12 T vs. C 0.25 (T) 0.392 (T) >1 (-) 6 (-) >0.05
rs9265971 chr6:31315792 HLA-B [-5857bp] C - 6 T vs. C 0.142 (C) 0.05 (C) >1 (-) 1 (-) >0.05
rs9266063 chr6:31319391 HLA-B [-2258bp] C - 4 A vs. C 0.4 (C) 0.458 (A) >1 (-) 0 (-) >0.05
rs1050747 chr6:31323296 HLA-B C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs28366097 chr6:31352830 RNU6-283P [+14813bp] C - 12 A vs. G 0.083 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs9265670 chr6:31300862 HLA-B [-20787bp] C - 5 A vs. G 0.433 (G) 0.5 (G) <1 (-) 57 (-) >0.05
rs145932762 chr6:31372956 MICA C - 7 A vs. T - - <1 (-) 4 (-) >0.05
rs2523605 chr6:31323409 HLA-B C - 4 T vs. C 0.217 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs9265621 chr6:31299694 HLA-B [-21955bp] C - 5 A vs. G 0.45 (A) 0.5 (A) >1 (-) 58 (-) >0.05
rs9265626 chr6:31299836 HLA-B [-21813bp] C - 5 T vs. C 0.45 (T) 0.483 (T) >1 (-) 59 (-) >0.05
rs2844572 chr6:31335575 RNU6-283P [-2336bp] C - 12 A vs. C 0.35 (C) 0.175 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]