HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9405031 chr6:31316324 HLA-B [-5325bp] C - 5 A vs. G 0.067 (G) 0.158 (G) <1 (-) 0 (-) >0.05
rs2442751 chr6:31351991 RNU6-283P [+13974bp] C - 12 A vs. G 0.342 (G) 0.375 (G) <1 (-) 0 (-) >0.05
rs2853994 chr6:31333063 RNU6-283P [-4848bp] C - 10 T vs. C 0.233 (T) - >1 (-) 38 (-) >0.05
rs2853996 chr6:31332915 RNU6-283P [-4996bp] C - 10 T vs. C 0.233 (T) - >1 (-) 38 (-) >0.05
rs9265974 chr6:31315879 HLA-B [-5770bp] C - 6 T vs. G 0.142 (G) 0.05 (G) >1 (-) 2 (-) >0.05
rs2523543 chr6:31333914 RNU6-283P [-3997bp] C - 10 A vs. G 0.233 (G) 0.033 (G) <1 (-) 38 (-) >0.05
rs9265998 chr6:31316613 HLA-B [-5036bp] C - 6 A vs. G 0.133 (A) 0.033 (A) <1 (-) 2 (-) >0.05
rs9265964 chr6:31315618 HLA-B [-6031bp] C - 6 A vs. G 0.133 (G) 0.05 (G) >1 (-) 1 (-) >0.05
rs9265672 chr6:31300916 HLA-B [-20733bp] C - 5 A vs. G 0.467 (G) 0.5 (G) <1 (-) 56 (-) >0.05
rs2854010 chr6:31312492 HLA-B [-9157bp] C - 6 A vs. G 0.142 (G) 0.05 (G) >1 (-) 6 (-) >0.05
rs9265669 chr6:31300829 HLA-B [-20820bp] C - 5 A vs. G 0.433 (A) 0.492 (A) >1 (-) 57 (-) >0.05
rs28752479 chr6:31352366 RNU6-283P [+14349bp] C - 12 A vs. C 0.083 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs28366093 chr6:31352674 RNU6-283P [+14657bp] C - 12 A vs. G 0.083 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs9265979 chr6:31316044 HLA-B [-5605bp] C - 6 T vs. C 0.133 (T) 0.05 (T) <1 (-) 1 (-) >0.05
rs2523540 chr6:31335330 RNU6-283P [-2581bp] C - 12 C vs. G 0.35 (C) 0.125 (C) <1 (-) 0 (-) >0.05
rs28366091 chr6:31352459 RNU6-283P [+14442bp] C - 12 T vs. G 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs9265973 chr6:31315861 HLA-B [-5788bp] C - 6 A vs. G 0.133 (A) 0.05 (A) <1 (-) 1 (-) >0.05
rs9265976 chr6:31315933 HLA-B [-5716bp] C - 6 A vs. G 0.142 (G) 0.05 (G) >1 (-) 1 (-) >0.05
rs3873387 chr6:31275663 HLA-C [+35756bp] C - 11 A vs. C 0.2 (A) 0.108 (A) >1 (-) 2 (-) >0.05
rs2523530 chr6:31337654 RNU6-283P [-257bp] C - 10 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs28366092 chr6:31352549 RNU6-283P [+14532bp] C - 12 T vs. C 0.083 (C) - <1 (-) 0 (-) >0.05
rs28366094 chr6:31352702 RNU6-283P [+14685bp] C - 12 T vs. G 0.083 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs73390248 chr6:31329834 HLA-B [+4869bp] C - 12 T vs. C 0.1 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs28366095 chr6:31352748 RNU6-283P [+14731bp] C - 12 T vs. C 0.083 (C) - <1 (-) 0 (-) >0.05
rs114170382 chr6:31345421 RNU6-283P [+7404bp] C - 6 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs149120518 chr6:31336356 RNU6-283P [-1555bp] C - 4 T vs. G - - <1 (-) 41 (-) >0.05
rs112168410 chr6:31335189 RNU6-283P [-2722bp] C - 5 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs9265985 chr6:31316234 HLA-B [-5415bp] C - 6 A vs. C 0.133 (C) 0.042 (C) >1 (-) 2 (-) >0.05
rs28366098 chr6:31352844 RNU6-283P [+14827bp] C - 12 A vs. G 0.083 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs28366096 chr6:31352776 RNU6-283P [+14759bp] C - 12 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs9265681 chr6:31301098 HLA-B [-20551bp] C - 5 A vs. G 0.45 (G) 0.492 (G) <1 (-) 55 (-) >0.05
rs9265982 chr6:31316080 HLA-B [-5569bp] C - 6 T vs. C 0.142 (T) - <1 (-) 1 (-) >0.05
rs9265972 chr6:31315805 HLA-B [-5844bp] C - 6 C vs. G 0.142 (C) 0.05 (C) <1 (-) 0 (-) >0.05
rs2844573 chr6:31335454 RNU6-283P [-2457bp] C - 12 A vs. C 0.35 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs7751725 chr6:31360433 MICA [-10923bp] C - 9 A vs. G 0.208 (G) 0.267 (G) >1 (-) 0 (-) >0.05
rs9265667 chr6:31300733 HLA-B [-20916bp] C - 5 A vs. T 0.45 (A) 0.483 (A) >1 (-) 59 (-) >0.05
rs9265674 chr6:31300960 HLA-B [-20689bp] C - 5 T vs. G 0.433 (G) 0.5 (G) <1 (-) 57 (-) >0.05
rs3020582 chr6:31351522 RNU6-283P [+13505bp] C - 12 A vs. C 0.325 (A) 0.142 (A) >1 (-) 0 (-) >0.05
rs9265675 chr6:31300968 HLA-B [-20681bp] C - 5 T vs. C 0.433 (C) 0.5 (C) <1 (-) 57 (-) >0.05
rs28366099 chr6:31352902 RNU6-283P [+14885bp] C - 12 T vs. C 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs9265990 chr6:31316448 HLA-B [-5201bp] C - 6 A vs. T 0.142 (A) 0.033 (A) <1 (-) 1 (-) >0.05
rs2250287 chr6:31330251 HLA-B [+5286bp] C - 10 T vs. G 0.233 (G) 0.017 (G) <1 (-) 38 (-) >0.05
rs9265993 chr6:31316520 HLA-B [-5129bp] C - 6 A vs. G 0.1 (A) 0.05 (A) <1 (-) 1 (-) >0.05
rs2844571 chr6:31335647 RNU6-283P [-2264bp] C - 12 T vs. C 0.35 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs2442753 chr6:31351733 RNU6-283P [+13716bp] C - 12 T vs. C 0.217 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs9265682 chr6:31301118 HLA-B [-20531bp] C - 5 A vs. G 0.442 (A) 0.492 (A) >1 (-) 55 (-) >0.05
rs2428488 chr6:31352984 RNU6-283P [+14967bp] C - 12 A vs. G 0.083 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs2428487 chr6:31353039 RNU6-283P [+15022bp] C - 12 A vs. T 0.083 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs2844563 chr6:31339455 RNU6-283P [+1438bp] C - 10 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs9265666 chr6:31300731 HLA-B [-20918bp] C - 5 A vs. G 0.45 (A) 0.492 (A) >1 (-) 59 (-) >0.05

Association studies for this region [+]