HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9265722 chr6:31302128 HLA-B [-19521bp] C - 4 T vs. C 0.45 (C) 0.5 (C) <1 (-) 47 (-) <0.05
rs2596540 chr6:31367882 MICA [-3474bp] C - 10 A vs. G 0.183 (A) 0.042 (A) >1 (-) 0 (-) <0.05
rs4991648 chr6:31337691 RNU6-283P [-220bp] C - 12 A vs. G 0.358 (A) 0.367 (A) >1 (-) 0 (-) <0.05
rs4991649 chr6:31337695 RNU6-283P [-216bp] C - 12 A vs. G 0.367 (G) 0.367 (G) <1 (-) 0 (-) <0.05
rs28771423 chr6:31315149 HLA-B [-6500bp] C - 5 A vs. G 0.325 (A) 0.458 (A) <1 (-) 30 (-) <0.05
rs140949683 chr6:31333103 RNU6-283P [-4808bp] C - 8 A vs. G - - >1 (-) 32 (-) <0.05
rs2844555 chr6:31341379 RNU6-283P [+3362bp] C - 10 T vs. C 0.433 (C) 0.358 (C) <1 (-) 13 (-) <0.05
rs5006725 chr6:31337872 RNU6-283P [-39bp] C - 12 A vs. G 0.342 (A) 0.283 (A) >1 (-) 0 (-) <0.05
rs9717841 chr6:31275485 HLA-C [+35578bp] C - 11 T vs. C 0.075 (T) 0.333 (T) <1 (-) 17 (-) <0.05
rs2254556 chr6:31342631 RNU6-283P [+4614bp] C - 12 T vs. C 0.192 (T) 0.075 (T) >1 (-) 37 (-) <0.05
rs116579023 chr6:31331695 RNU6-283P [-6216bp] C - 7 A vs. C 0.042 (A) 0.092 (A) >1 (-) 40 (-) <0.05
rs2523644 chr6:31342484 RNU6-283P [+4467bp] C - 12 T vs. C 0.183 (C) 0.083 (C) <1 (-) 37 (-) <0.05
rs9266057 chr6:31319176 HLA-B [-2473bp] C - 5 T vs. G 0.367 (G) 0.142 (G) <1 (-) 7 (-) <0.05
rs9265705 chr6:31301848 HLA-B [-19801bp] C - 4 T vs. G 0.467 (G) 0.492 (T) <1 (-) 46 (-) <0.05
rs9265721 chr6:31302097 HLA-B [-19552bp] C - 4 C vs. G 0.458 (C) 0.5 (C) >1 (-) 46 (-) <0.05
rs12524487 chr6:31354238 RNU6-283P [+16221bp] C - 12 T vs. C 0.058 (T) 0.25 (T) <1 (-) 0 (-) <0.05
rs9266451 chr6:31338183 RNU6-283P [+166bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs2596544 chr6:31329291 HLA-B [+4326bp] C - 9 A vs. T - - <1 (-) 14 (-) <0.05
rs9265961 chr6:31315501 HLA-B [-6148bp] C - 5 A vs. G 0.442 (A) 0.183 (A) >1 (-) 0 (-) <0.05
rs9266445 chr6:31338108 RNU6-283P [+91bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs9266444 chr6:31338093 RNU6-283P [+76bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs28615506 chr6:31275691 HLA-C [+35784bp] C - 11 A vs. C 0.05 (C) 0.35 (C) >1 (-) 18 (-) >0.05
rs9265720 chr6:31302090 HLA-B [-19559bp] C - 4 C vs. G 0.45 (C) 0.5 (C) >1 (-) 46 (-) >0.05
rs2523560 chr6:31330844 HLA-B [+5879bp] C - 12 T vs. C 0.392 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs9265719 chr6:31302086 HLA-B [-19563bp] C - 4 A vs. T 0.45 (A) 0.5 (A) >1 (-) 46 (-) >0.05
rs34812177 chr6:31355603 MICA [-15753bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs115634993 chr6:31356209 MICA [-15147bp] C - 4 A vs. G 0.208 (A) - >1 (-) 20 (-) >0.05
rs3997984 chr6:31351090 RNU6-283P [+13073bp] C - 9 A vs. G 0.033 (A) - >1 (-) 56 (-) >0.05
rs12660817 chr6:31336757 RNU6-283P [-1154bp] C - 8 A vs. G 0.042 (G) 0.1 (G) >1 (-) 32 (-) >0.05
rs2923003 chr6:31373445 MICA C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs4959017 chr6:31343400 RNU6-283P [+5383bp] C - 12 A vs. T 0.192 (A) 0.083 (A) >1 (-) 38 (-) >0.05
rs9265714 chr6:31301966 HLA-B [-19683bp] C - 4 A vs. G 0.433 (G) 0.492 (A) <1 (-) 46 (-) >0.05
rs9266455 chr6:31338385 RNU6-283P [+368bp] C - 12 T vs. C 0.333 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs9265713 chr6:31301962 HLA-B [-19687bp] C - 4 T vs. C 0.433 (T) 0.492 (T) >1 (-) 46 (-) >0.05
rs56189237 chr6:31328518 HLA-B [+3553bp] C - 5 A vs. G 0.075 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs2904598 chr6:31356943 MICA [-14413bp] C - 4 A vs. T - - >1 (-) 20 (-) >0.05
rs9264946 chr6:31274634 HLA-C [+34727bp] C - 11 T vs. C 0.2 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs3763287 chr6:31370329 MICA [-1027bp] C - 10 A vs. C 0.058 (A) 0.142 (A) <1 (-) 0 (-) >0.05
rs4959066 chr6:31343347 RNU6-283P [+5330bp] C - 12 A vs. G 0.192 (G) 0.117 (G) <1 (-) 38 (-) >0.05
rs9265710 chr6:31301894 HLA-B [-19755bp] C - 4 T vs. C 0.467 (C) 0.5 (C) <1 (-) 46 (-) >0.05
rs9394057 chr6:31273692 HLA-C [+33785bp] C - 11 A vs. G 0.075 (G) 0.267 (G) >1 (-) 13 (-) >0.05
rs4959018 chr6:31343425 RNU6-283P [+5408bp] C - 12 A vs. G 0.2 (A) 0.083 (A) >1 (-) 39 (-) >0.05
rs9265709 chr6:31301883 HLA-B [-19766bp] C - 4 A vs. G - - <1 (-) 47 (-) >0.05
rs3997993 chr6:31344252 RNU6-283P [+6235bp] C - 12 C vs. G 0.192 (C) 0.117 (C) >1 (-) 39 (-) >0.05
rs4349859 chr6:31365787 MICA [-5569bp] C - 8 A vs. G 0.033 (A) - >1 (-) 54 (-) >0.05
rs3873395 chr6:31342370 RNU6-283P [+4353bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs9265706 chr6:31301862 HLA-B [-19787bp] C - 4 T vs. C 0.475 (T) 0.492 (C) >1 (-) 47 (-) >0.05
rs9266453 chr6:31338337 RNU6-283P [+320bp] C - 12 A vs. G 0.35 (G) 0.292 (G) <1 (-) 0 (-) >0.05
rs9266454 chr6:31338360 RNU6-283P [+343bp] C - 12 A vs. G 0.342 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs145575084 chr6:31365089 MICA [-6267bp] C - 8 C vs. G - - >1 (-) 54 (-) >0.05

Association studies for this region [+]