MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs59414525 chr1:205521116 RNU2-19P [-14728bp] C - 7 T vs. C 0.35 (T) - <1 (-) 22 (-) >0.05
rs10900513 chr1:205529303 RNU2-19P [-6541bp] C - 13 T vs. C 0.283 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs11240520 chr1:205533005 RNU2-19P [-2839bp] C - 13 A vs. G 0.283 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs12755324 chr1:205524334 RNU2-19P [-11510bp] C - 13 A vs. G 0.283 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs12023128 chr1:205598225 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs11240517 chr1:205524595 RNU2-19P [-11249bp] C - 13 A vs. G 0.267 (G) 0.042 (G) <1 (-) 10 (-) >0.05
rs113230166 chr1:205497743 CDK18 C - 9 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs14028 chr1:205501521 CDK18 C - 13 A vs. G 0.283 (G) 0.308 (G) >1 (-) 5 (-) >0.05
rs11240524 chr1:205539148 MFSD4 C - 13 T vs. C 0.467 (C) 0.025 (C) <1 (-) 0 (-) >0.05
rs8027 chr1:205501843 CDK18 C - 13 A vs. G 0.3 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs4951243 chr1:205533520 RNU2-19P [-2324bp] C - 13 T vs. C 0.283 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs77496520 chr1:205545985 MFSD4 C - 13 A vs. G 0.067 (A) - <1 (-) 0 (-) >0.05
rs12126276 chr1:205494508 CDK18 C - 11 A vs. G 0.133 (A) 0.108 (A) <1 (-) 39 (-) >0.05
rs76069011 chr1:205500342 CDK18 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs7530988 chr1:205558200 MFSD4 C - 13 A vs. G 0.333 (G) 0.067 (G) <1 (-) 0 (-) >0.05
rs11545017 chr1:205611677 ELK4 [+10587bp] C - 13 A vs. G 0.383 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs146414537 chr1:205583253 ELK4 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs4951248 chr1:205601119 ELK4 [+29bp] C - 11 A vs. T - 0.342 (A) <1 (-) 0 (-) >0.05
rs74141238 chr1:205492486 CDK18 C - 11 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs12122797 chr1:205494512 CDK18 C - 13 A vs. G 0.192 (G) 0.108 (G) >1 (-) 44 (-) >0.05
rs12073016 chr1:205543323 MFSD4 C - 13 T vs. C 0.108 (T) 0.042 (T) <1 (-) 10 (-) >0.05
rs1042832 chr1:205501469 CDK18 C - 13 A vs. G 0.292 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs2868564 chr1:205506952 CDK18 [+5031bp] C - 13 A vs. G 0.092 (G) 0.275 (G) >1 (-) 21 (-) >0.05
rs10793738 chr1:205512318 CDK18 [+10397bp] C - 13 A vs. G 0.25 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs74142375 chr1:205500719 CDK18 C - 9 A vs. T - - >1 (-) 0 (-) >0.05
rs4951236 chr1:205504159 CDK18 [+2238bp] C - 13 T vs. C 0.117 (C) 0.283 (C) >1 (-) 22 (-) >0.05
rs74142451 chr1:205564333 MFSD4 C - 11 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs34851857 chr1:205600344 ELK4 C - 13 T vs. C 0.042 (T) 0.183 (T) <1 (-) 1 (-) >0.05
rs12134296 chr1:205510971 CDK18 [+9050bp] C - 13 A vs. G 0.258 (A) 0.008 (A) >1 (-) 1 (-) >0.05
rs10751439 chr1:205510600 CDK18 [+8679bp] C - 13 T vs. G 0.258 (T) 0.008 (T) >1 (-) 1 (-) >0.05
rs10900506 chr1:205511554 CDK18 [+9633bp] C - 13 T vs. C - - <1 (-) 1 (-) >0.05
rs10793737 chr1:205511901 CDK18 [+9980bp] C - 13 T vs. C 0.25 (C) 0.008 (C) <1 (-) 1 (-) >0.05
rs10793736 chr1:205511872 CDK18 [+9951bp] C - 13 C vs. G 0.258 (C) 0.008 (C) >1 (-) 1 (-) >0.05
rs6673283 chr1:205615791 SLC45A3 [-11188bp] C - 13 A vs. G 0.367 (G) 0.333 (G) <1 (-) 16 (-) >0.05
rs10900507 chr1:205511748 CDK18 [+9827bp] C - 13 A vs. G 0.267 (A) 0.017 (A) >1 (-) 1 (-) >0.05
rs56171637 chr1:205572951 MFSD4 [+905bp] C - 9 A vs. C - - >1 (-) 3 (-) >0.05
rs28541323 chr1:205614117 SLC45A3 [-12862bp] C - 13 A vs. G 0.4 (G) 0.358 (G) <1 (-) 9 (-) >0.05
rs7539751 chr1:205560119 MFSD4 C - 13 T vs. C 0.075 (T) 0.033 (T) <1 (-) 8 (-) >0.05
rs3088136 chr1:205601464 ELK4 [+374bp] C - 13 C vs. G 0.158 (G) 0.358 (G) >1 (-) 11 (-) >0.05
rs4951247 chr1:205597321 ELK4 C - 13 A vs. G 0.092 (A) 0.35 (G) <1 (-) 14 (-) >0.05
rs12079844 chr1:205508580 CDK18 [+6659bp] C - 13 T vs. C 0.308 (T) 0.042 (T) >1 (-) 12 (-) >0.05
rs11240510 chr1:205508573 CDK18 [+6652bp] C - 13 A vs. C 0.267 (A) 0.042 (A) >1 (-) 12 (-) >0.05
rs12080053 chr1:205569170 MFSD4 C - 13 T vs. C 0.175 (C) - <1 (-) 0 (-) >0.05
rs11240533 chr1:205569190 MFSD4 C - 13 A vs. G 0.167 (G) - <1 (-) 0 (-) >0.05
rs6593950 chr1:205526197 RNU2-19P [-9647bp] C - 13 A vs. G 0.267 (A) 0.008 (A) >1 (-) 8 (-) >0.05
rs10082150 chr1:205525438 RNU2-19P [-10406bp] C - 13 A vs. G 0.275 (A) 0.042 (A) >1 (-) 8 (-) >0.05
rs4951239 chr1:205516807 CDK18 [+14886bp] C - 13 C vs. G - - >1 (-) 17 (-) >0.05
rs6677015 chr1:205616951 SLC45A3 [-10028bp] C - 13 A vs. G 0.358 (G) 0.333 (G) <1 (-) 16 (-) >0.05
rs16855729 chr1:205494924 CDK18 C - 13 T vs. C 0.058 (T) 0.067 (T) <1 (-) 56 (-) >0.05
rs112374673 chr1:205548956 MFSD4 C - 13 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.