MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11240540 chr1:205581853 ELK4 C - 13 T vs. C 0.033 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs4623769 chr1:205492679 CDK18 C - 12 A vs. G 0.033 (A) 0.058 (A) <1 (-) 49 (-) >0.05
rs114839945 chr1:205529597 RNU2-19P [-6247bp] C - 7 T vs. C 0.008 (C) - >1 (-) 30 (-) >0.05
rs41310919 chr1:205494411 CDK18 C - 12 A vs. G 0.058 (A) 0.067 (A) <1 (-) 48 (-) >0.05
rs115642143 chr1:205603174 ELK4 [+2084bp] C - 13 T vs. C 0.025 (C) - <1 (-) 0 (-) >0.05
rs74931401 chr1:205571840 MFSD4 C - 13 C vs. G 0.033 (C) - >1 (-) 0 (-) >0.05
rs74144434 chr1:205606073 ELK4 [+4983bp] C - 13 A vs. G 0.15 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs12025838 chr1:205600085 ELK4 C - 12 T vs. G 0.025 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs112245398 chr1:205531518 RNU2-19P [-4326bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs148997803 chr1:205563710 MFSD4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
chr1:205527733 chr1:205527733 RNU2-19P [-8111bp] C - 8 A vs. G - - <1 (-) 9 (-) >0.05
rs138401063 chr1:205547505 MFSD4 C - 9 A vs. T - - >1 (-) 0 (-) >0.05
rs114926705 chr1:205503767 CDK18 [+1846bp] C - 12 T vs. C - 0.033 (T) >1 (-) 0 (-) >0.05
rs4951014 chr1:205571793 MFSD4 C - 13 A vs. G 0.125 (G) 0.35 (A) >1 (-) 15 (-) >0.05
rs79677312 chr1:205611143 ELK4 [+10053bp] C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs16856019 chr1:205571467 MFSD4 C - 13 T vs. C 0.125 (T) 0.35 (C) <1 (-) 14 (-) >0.05
rs77516432 chr1:205523906 RNU2-19P [-11938bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs144414741 chr1:205585863 ELK4 C - 6 T vs. C - - <1 (-) 43 (-) >0.05
rs2867891 chr1:205598979 ELK4 C - 13 A vs. G 0.1 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs6677703 chr1:205558976 MFSD4 C - 13 A vs. G 0.4 (A) 0.375 (G) <1 (-) 4 (-) >0.05
rs61822874 chr1:205535684 RNU2-19P [-160bp] C - 13 T vs. C 0.025 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs12079317 chr1:205506063 CDK18 [+4142bp] C - 12 A vs. G 0.017 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs12126693 chr1:205489915 CDK18 C - 13 A vs. G 0.283 (A) 0.067 (A) >1 (-) 0 (-) >0.05
rs77858758 chr1:205530284 RNU2-19P [-5560bp] C - 3 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs115771567 chr1:205496328 CDK18 C - 12 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs56960802 chr1:205565159 MFSD4 C - 11 T vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs144171663 chr1:205616555 SLC45A3 [-10424bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs3789461 chr1:205588637 ELK4 C - 13 T vs. C 0.058 (T) 0.358 (T) <1 (-) 18 (-) >0.05
rs55675283 chr1:205488983 CDK18 C - 12 A vs. G 0.058 (A) 0.025 (A) <1 (-) 27 (-) >0.05
rs78546085 chr1:205512478 CDK18 [+10557bp] C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs142214797 chr1:205509698 CDK18 [+7777bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs114126607 chr1:205518765 CDK18 [+16844bp] C - 12 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs116660751 chr1:205517854 CDK18 [+15933bp] C - 12 T vs. C 0.017 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs6658344 chr1:205544694 MFSD4 C - 13 A vs. G 0.183 (G) 0.15 (G) <1 (-) 9 (-) >0.05
rs1891506 chr1:205543862 MFSD4 C - 13 A vs. G 0.175 (G) 0.142 (G) <1 (-) 5 (-) >0.05
rs2153902 chr1:205616763 SLC45A3 [-10216bp] C - 12 T vs. G 0.333 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs149316132 chr1:205519876 RNU2-19P [-15968bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs114804080 chr1:205502803 CDK18 [+882bp] C - 12 C vs. G 0.008 (C) - >1 (-) 0 (-) >0.05
rs12407348 chr1:205573960 MFSD4 [+1914bp] C - 13 T vs. G - - >1 (-) 18 (-) >0.05
rs115770308 chr1:205536292 RNU2-19P [+365bp] C - 8 A vs. G 0.025 (A) - <1 (-) 30 (-) >0.05
rs55737952 chr1:205566279 MFSD4 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs118069551 chr1:205500908 CDK18 C - 12 C vs. G - 0.033 (C) >1 (-) 0 (-) >0.05
rs58128026 chr1:205566622 MFSD4 C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs76935849 chr1:205621684 SLC45A3 [-5295bp] C - 12 T vs. C - 0.017 (T) >1 (-) 0 (-) >0.05
rs140212590 chr1:205531772 RNU2-19P [-4072bp] C - 7 T vs. C - - <1 (-) 13 (-) >0.05
rs12036780 chr1:205542874 MFSD4 C - 13 A vs. C 0.442 (A) 0.025 (C) <1 (-) 0 (-) >0.05
rs114114637 chr1:205500022 CDK18 C - 12 A vs. C 0.017 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs79637404 chr1:205618730 SLC45A3 [-8249bp] C - 12 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs6593961 chr1:205619544 SLC45A3 [-7435bp] C - 12 T vs. G 0.033 (T) - >1 (-) 0 (-) >0.05
rs113418196 chr1:205620585 SLC45A3 [-6394bp] C - 12 A vs. C 0.033 (A) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.