MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs112871603 chr1:205620494 SLC45A3 [-6485bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7555438 chr1:205570959 MFSD4 C - 13 T vs. C - - >1 (-) 19 (-) >0.05
rs116088219 chr1:205499207 CDK18 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs114269266 chr1:205618596 SLC45A3 [-8383bp] C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs41308411 chr1:205568216 MFSD4 C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs79314271 chr1:205548777 MFSD4 C - 13 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs114984955 chr1:205491317 CDK18 C - 12 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs12759507 chr1:205546615 MFSD4 C - 13 T vs. C 0.258 (C) 0.158 (C) >1 (-) 31 (-) >0.05
rs74141240 chr1:205493246 CDK18 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs114179834 chr1:205496378 CDK18 C - 12 A vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs149513069 chr1:205603424 ELK4 [+2334bp] C - 13 T vs. C - - <1 (-) 62 (-) >0.05
rs114121546 chr1:205532417 RNU2-19P [-3427bp] C - 12 T vs. C 0.017 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs6593949 chr1:205506597 CDK18 [+4676bp] C - 11 A vs. G 0.008 (A) 0.0 (A) >1 (-) 0 (-) >0.05
rs115147358 chr1:205533278 RNU2-19P [-2566bp] C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs75555091 chr1:205606054 ELK4 [+4964bp] C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs11240528 chr1:205558675 MFSD4 C - 13 A vs. G 0.492 (A) 0.375 (G) <1 (-) 0 (-) >0.05
rs142923181 chr1:205598735 ELK4 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs1338608 chr1:205517299 CDK18 [+15378bp] C - 11 T vs. C 0.008 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs7533594 chr1:205558402 MFSD4 C - 13 T vs. G 0.233 (G) - <1 (-) 0 (-) >0.05
rs143896890 chr1:205489684 CDK18 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs148116625 chr1:205489588 CDK18 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs116965203 chr1:205526261 RNU2-19P [-9583bp] C - 12 T vs. C - 0.033 (C) <1 (-) 0 (-) >0.05
rs4369284 chr1:205605543 ELK4 [+4453bp] C - 13 A vs. G - - <1 (-) 59 (-) >0.05
rs12134829 chr1:205570406 MFSD4 C - 13 A vs. T 0.125 (A) 0.35 (T) <1 (-) 20 (-) >0.05
rs117467805 chr1:205508047 CDK18 [+6126bp] C - 12 T vs. C - 0.042 (C) <1 (-) 0 (-) >0.05
rs78298705 chr1:205545108 MFSD4 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs116180003 chr1:205606706 ELK4 [+5616bp] C - 13 T vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs74680854 chr1:205504379 CDK18 [+2458bp] C - 12 T vs. C 0.017 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs7528324 chr1:205619184 SLC45A3 [-7795bp] C - 10 A vs. C 0.033 (A) - >1 (-) 0 (-) >0.05
rs77244682 chr1:205607153 ELK4 [+6063bp] C - 12 A vs. G 0.033 (A) 0.017 (A) >1 (-) 0 (-) >0.05
rs111386762 chr1:205607954 ELK4 [+6864bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs114616992 chr1:205540089 MFSD4 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs145003200 chr1:205534129 RNU2-19P [-1715bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs61822898 chr1:205542927 MFSD4 C - 13 C vs. G - 0.167 (G) >1 (-) 0 (-) >0.05
rs59246234 chr1:205542063 MFSD4 C - 13 A vs. G 0.008 (G) - >1 (-) 0 (-) >0.05
rs56770621 chr1:205542167 MFSD4 C - 13 A vs. G - 0.15 (A) <1 (-) 0 (-) >0.05
rs73078313 chr1:205567133 MFSD4 C - 6 T vs. C - - <1 (-) 27 (-) >0.05
rs73078311 chr1:205565739 MFSD4 C - 6 A vs. G - - <1 (-) 28 (-) >0.05
rs3818970 chr1:205569973 MFSD4 C - 13 T vs. C 0.125 (C) 0.35 (T) >1 (-) 8 (-) >0.05
rs12041432 chr1:205570770 MFSD4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs10793741 chr1:205608984 ELK4 [+7894bp] C - 13 A vs. G 0.333 (G) 0.283 (G) <1 (-) 5 (-) >0.05
rs6660483 chr1:205517755 CDK18 [+15834bp] C - 11 T vs. C 0.008 (T) 0.0 (T) >1 (-) 0 (-) >0.05
rs113947322 chr1:205607769 ELK4 [+6679bp] C - 13 A vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs34103393 chr1:205575846 ELK4 [-1225bp] C - 13 A vs. G 0.017 (G) 0.367 (G) >1 (-) 0 (-) >0.05
rs113299719 chr1:205560524 MFSD4 C - 6 T vs. C - - <1 (-) 28 (-) >0.05
rs55905370 chr1:205541885 MFSD4 C - 13 A vs. G 0.008 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs113130771 chr1:205489305 CDK18 C - 6 A vs. G - - <1 (-) 40 (-) >0.05
rs12409912 chr1:205525752 RNU2-19P [-10092bp] C - 12 A vs. G 0.025 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs45479796 chr1:205498843 CDK18 C - 11 T vs. G 0.025 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs12735654 chr1:205561773 MFSD4 C - 13 A vs. C 0.158 (A) 0.375 (G) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.