MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78202794 chr1:205599921 ELK4 C - 13 T vs. C 0.033 (T) 0.25 (T) <1 (-) 59 (-) >0.05
rs6658336 chr1:205544671 MFSD4 C - 13 A vs. G 0.433 (A) 0.175 (G) <1 (-) 0 (-) >0.05
rs61822866 chr1:205512773 CDK18 [+10852bp] C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs12407001 chr1:205507050 CDK18 [+5129bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12410269 chr1:205526637 RNU2-19P [-9207bp] C - 12 A vs. G 0.017 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs61822301 chr1:205506383 CDK18 [+4462bp] C - 11 A vs. C - 0.108 (A) <1 (-) 0 (-) >0.05
rs12406966 chr1:205506765 CDK18 [+4844bp] C - 11 A vs. G 0.017 (A) 0.1 (A) <1 (-) 0 (-) >0.05
rs2282449 chr1:205568213 MFSD4 C - 13 T vs. C 0.125 (T) 0.35 (C) <1 (-) 9 (-) >0.05
rs112358150 chr1:205603404 ELK4 [+2314bp] C - 13 C vs. G - - >1 (-) 58 (-) >0.05
rs36007652 chr1:205566407 MFSD4 C - 13 T vs. C 0.067 (T) 0.358 (T) <1 (-) 0 (-) >0.05
rs7519776 chr1:205574611 ELK4 [-2460bp] C - 13 T vs. G 0.058 (T) 0.292 (T) <1 (-) 45 (-) >0.05
rs61822873 chr1:205532876 RNU2-19P [-2968bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7519599 chr1:205574492 MFSD4 [+2446bp] C - 13 C vs. G 0.067 (C) 0.292 (C) <1 (-) 53 (-) >0.05
rs56103713 chr1:205532018 RNU2-19P [-3826bp] C - 13 C vs. G 0.025 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs3820377 chr1:205501181 CDK18 C - 13 T vs. C 0.442 (T) 0.433 (T) <1 (-) 0 (-) >0.05
rs77571454 chr1:205500478 CDK18 C - 9 A vs. G - 0.042 (A) >1 (-) 66 (-) >0.05
rs6681250 chr1:205556353 MFSD4 C - 13 T vs. G 0.15 (T) 0.025 (T) >1 (-) 9 (-) >0.05
rs56318452 chr1:205541408 MFSD4 C - 13 T vs. C - 0.125 (T) <1 (-) 0 (-) >0.05
rs12406407 chr1:205613234 ELK4 [+12144bp] C - 13 C vs. G 0.333 (C) - >1 (-) 9 (-) >0.05
rs7549710 chr1:205601189 ELK4 [+99bp] C - 13 T vs. C 0.067 (T) 0.342 (T) <1 (-) 58 (-) >0.05
rs113551063 chr1:205587849 ELK4 C - 13 A vs. G - - <1 (-) 59 (-) >0.05
rs58615888 chr1:205518764 CDK18 [+16843bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs57090570 chr1:205521092 RNU2-19P [-14752bp] C - 12 T vs. C - - <1 (-) 30 (-) >0.05
rs61822298 chr1:205497599 CDK18 C - 12 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs6678253 chr1:205555807 MFSD4 C - 13 T vs. G 0.15 (T) - >1 (-) 10 (-) >0.05
rs116426872 chr1:205585067 ELK4 C - 12 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs6688760 chr1:205581521 ELK4 C - 13 A vs. G 0.033 (A) 0.317 (A) <1 (-) 58 (-) >0.05
rs149663440 chr1:205506310 CDK18 [+4389bp] C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs10900502 chr1:205503877 CDK18 [+1956bp] C - 13 A vs. G 0.458 (G) 0.433 (A) >1 (-) 0 (-) >0.05
rs112605889 chr1:205553460 MFSD4 C - 13 T vs. C - - >1 (-) 10 (-) >0.05
rs16855911 chr1:205551495 MFSD4 C - 13 T vs. C 0.158 (T) 0.017 (T) >1 (-) 10 (-) >0.05
rs74231753 chr1:205582251 ELK4 C - 13 A vs. G 0.033 (A) 0.317 (A) <1 (-) 58 (-) >0.05
rs6677586 chr1:205581376 ELK4 C - 13 A vs. G 0.033 (G) 0.308 (G) >1 (-) 59 (-) >0.05
rs113504452 chr1:205540360 MFSD4 C - 6 A vs. G - - >1 (-) 28 (-) >0.05
rs11805661 chr1:205562524 MFSD4 C - 13 A vs. G - - <1 (-) 30 (-) >0.05
rs114658321 chr1:205568866 MFSD4 C - 13 A vs. C 0.058 (A) 0.017 (A) <1 (-) 26 (-) >0.05
rs11805457 chr1:205619598 SLC45A3 [-7381bp] C - 13 T vs. C 0.333 (C) 0.233 (C) <1 (-) 7 (-) >0.05
rs4951249 chr1:205615594 SLC45A3 [-11385bp] C - 13 T vs. C 0.4 (C) 0.317 (T) <1 (-) 0 (-) >0.05
rs147131526 chr1:205598674 ELK4 C - 12 A vs. G - - >1 (-) 19 (-) >0.05
rs140299092 chr1:205584398 ELK4 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs74742063 chr1:205548329 MFSD4 C - 13 T vs. C 0.15 (C) 0.05 (C) <1 (-) 16 (-) >0.05
rs12035608 chr1:205541515 MFSD4 C - 13 A vs. C 0.433 (A) 0.192 (C) <1 (-) 0 (-) >0.05
rs11240522 chr1:205534419 RNU2-19P [-1425bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs10900519 chr1:205618564 SLC45A3 [-8415bp] C - 13 A vs. C 0.333 (C) 0.292 (C) <1 (-) 5 (-) >0.05
rs72748976 chr1:205536793 RNU2-19P [+866bp] C - 13 T vs. C 0.025 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs72748980 chr1:205543045 MFSD4 C - 13 A vs. G 0.025 (A) - <1 (-) 17 (-) >0.05
rs2153903 chr1:205616849 SLC45A3 [-10130bp] C - 13 A vs. G 0.333 (A) 0.283 (A) >1 (-) 8 (-) >0.05
rs2282450 chr1:205568390 MFSD4 C - 13 A vs. T 0.158 (A) 0.342 (T) <1 (-) 19 (-) >0.05
rs7523059 chr1:205550898 MFSD4 C - 12 A vs. G 0.158 (G) 0.025 (G) <1 (-) 16 (-) >0.05
rs7531230 chr1:205498021 CDK18 C - 13 T vs. C 0.458 (C) 0.458 (C) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.