MFSD4, chr1:205538013-205572046 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148166476 chr1:205549297 MFSD4 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs115071625 chr1:205525273 RNU2-19P [-10571bp] C - 9 T vs. C 0.008 (T) - >1 (-) 21 (-) >0.05
rs2153901 chr1:205550777 MFSD4 C - 13 T vs. C 0.158 (T) - >1 (-) 11 (-) >0.05
rs2297837 chr1:205495392 CDK18 C - 9 A vs. G 0.017 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs116496826 chr1:205545803 MFSD4 C - 9 A vs. G 0.008 (A) - >1 (-) 21 (-) >0.05
rs12032788 chr1:205538918 MFSD4 C - 13 A vs. C 0.45 (A) 0.183 (C) <1 (-) 0 (-) >0.05
rs17347710 chr1:205609410 ELK4 [+8320bp] C - 13 A vs. G 0.1 (G) 0.025 (G) >1 (-) 14 (-) >0.05
rs12126801 chr1:205616154 SLC45A3 [-10825bp] C - 13 T vs. C 0.1 (C) 0.033 (C) >1 (-) 19 (-) >0.05
rs12128988 chr1:205612463 ELK4 [+11373bp] C - 13 T vs. G 0.1 (G) 0.025 (G) >1 (-) 16 (-) >0.05
rs12024377 chr1:205537858 MFSD4 [-155bp] C - 13 A vs. G 0.45 (A) - >1 (-) 0 (-) >0.05
rs34008697 chr1:205575225 ELK4 [-1846bp] C - 13 A vs. G 0.458 (A) 0.283 (G) <1 (-) 22 (-) >0.05
rs12092624 chr1:205567990 MFSD4 C - 13 T vs. C 0.392 (C) 0.3 (T) >1 (-) 11 (-) >0.05
rs12133326 chr1:205549274 MFSD4 C - 13 T vs. C 0.158 (T) - >1 (-) 9 (-) >0.05
rs72750914 chr1:205602272 ELK4 [+1182bp] C - 9 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs7531623 chr1:205555145 MFSD4 C - 13 A vs. G 0.35 (A) 0.2 (A) <1 (-) 0 (-) >0.05
rs77822322 chr1:205549122 MFSD4 C - 13 A vs. T 0.158 (A) - >1 (-) 9 (-) >0.05
rs12145143 chr1:205534118 RNU2-19P [-1726bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs75541573 chr1:205548619 MFSD4 C - 13 A vs. G 0.15 (A) 0.033 (A) >1 (-) 12 (-) >0.05
rs139159097 chr1:205582929 ELK4 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs2297836 chr1:205497066 CDK18 C - 13 A vs. G 0.075 (A) 0.083 (A) <1 (-) 51 (-) >0.05
rs12129381 chr1:205557506 MFSD4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs11240527 chr1:205545450 MFSD4 C - 13 T vs. C 0.367 (T) - >1 (-) 0 (-) >0.05
rs149505794 chr1:205541690 MFSD4 C - 8 A vs. G - - <1 (-) 1 (-) >0.05
rs139485123 chr1:205587024 ELK4 C - 10 A vs. C - - <1 (-) 0 (-) >0.05
rs28580089 chr1:205490098 CDK18 C - 6 A vs. G - - <1 (-) 21 (-) >0.05
rs12125386 chr1:205606830 ELK4 [+5740bp] C - 13 A vs. G 0.1 (A) - <1 (-) 18 (-) >0.05
rs4330975 chr1:205488487 CDK18 C - 12 A vs. G 0.083 (G) 0.25 (G) >1 (-) 49 (-) >0.05
rs6688499 chr1:205528634 RNU2-19P [-7210bp] C - 13 T vs. G 0.425 (T) 0.458 (G) >1 (-) 0 (-) >0.05
rs78847301 chr1:205507831 CDK18 [+5910bp] C - 6 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs144214963 chr1:205575271 ELK4 [-1800bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs3747969 chr1:205563634 MFSD4 C - 13 A vs. T - - <1 (-) 23 (-) >0.05
rs7529866 chr1:205489472 CDK18 C - 13 A vs. G 0.458 (G) 0.217 (A) <1 (-) 0 (-) >0.05
rs16855989 chr1:205567753 MFSD4 C - 13 T vs. C 0.058 (T) 0.283 (T) <1 (-) 47 (-) >0.05
rs57942570 chr1:205521051 RNU2-19P [-14793bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12041365 chr1:205510376 CDK18 [+8455bp] C - 13 A vs. G 0.467 (A) 0.308 (G) >1 (-) 0 (-) >0.05
rs10900515 chr1:205566547 MFSD4 C - 13 T vs. C 0.425 (C) - >1 (-) 17 (-) >0.05
rs6678545 chr1:205556027 MFSD4 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs144275775 chr1:205524596 RNU2-19P [-11248bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs12728206 chr1:205566236 MFSD4 C - 13 A vs. G 0.425 (G) 0.475 (A) >1 (-) 17 (-) >0.05
rs7525524 chr1:205490769 CDK18 C - 13 T vs. C 0.458 (T) 0.217 (C) >1 (-) 0 (-) >0.05
rs4090307 chr1:205540153 MFSD4 C - 13 A vs. G 0.15 (A) - <1 (-) 0 (-) >0.05
rs75755293 chr1:205534982 RNU2-19P [-862bp] C - 13 A vs. G 0.025 (A) - <1 (-) 9 (-) >0.05
rs7529442 chr1:205492756 CDK18 C - 9 A vs. G 0.008 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs4951244 chr1:205562324 MFSD4 C - 4 T vs. C 0.017 (T) - <1 (-) 66 (-) >0.05
rs11583698 chr1:205504428 CDK18 [+2507bp] C - 13 A vs. G 0.417 (A) 0.458 (G) >1 (-) 0 (-) >0.05
rs78623953 chr1:205582574 ELK4 C - 7 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs12565564 chr1:205621169 SLC45A3 [-5810bp] C - 13 A vs. G 0.075 (G) 0.042 (G) >1 (-) 25 (-) >0.05
rs146709978 chr1:205500586 CDK18 C - 13 C vs. G - - >1 (-) 0 (-) >0.05
rs2867892 chr1:205576917 ELK4 [-154bp] C - 13 A vs. G 0.458 (G) 0.283 (G) <1 (-) 12 (-) >0.05
rs7534154 chr1:205543767 MFSD4 C - 13 T vs. C 0.392 (T) - <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.